Cow genome map
| Conread name: | End1-UMC-pd10en3-022-e09 |
| Conread position: | 1-269 |
| Cow position: | chr18:20271381-20271121 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 13 |
| Conread position: | 1-270 |
| Cow position: | chr18:36477836-36478099 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 247, 16 |
| Conread position: | 18-270 |
| Cow position: | chr18:11166629-11166880 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 161 |
| Conread position: | 27-339 |
| Cow position: | chr18:33158625-33158920 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 31-270 |
| Cow position: | chr18:47931197-47930965 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 66, 134 |
| Conread position: | 41-268 |
| Cow position: | chr18:11680393-11680622 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 46-343 |
| Cow position: | chr18:4369103-4368795 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 49-351 |
| Cow position: | chr18:25647568-25647259 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 115 |
| Conread position: | 55-270 |
| Cow position: | chr18:5646937-5647148 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 171, 50 |
| Conread position: | 59-269 |
| Cow position: | chr18:11191126-11191329 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 59-349 |
| Cow position: | chr18:52632714-52632420 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 39, 172 |
| Conread position: | 60-270 |
| Cow position: | chr18:23808181-23807973 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 63-272 |
| Cow position: | chr18:4316002-4316213 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 100 |
| Conread position: | 65-349 |
| Cow position: | chr18:44262320-44262618 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 143 |
| Conread position: | 67-317 |
| Cow position: | chr18:41270788-41271048 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 67-347 |
| Cow position: | chr18:46048464-46048737 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 67-349 |
| Cow position: | chr18:33606335-33606618 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 154, 30 |
| Conread position: | 67-351 |
| Cow position: | chr18:29356930-29356635 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 68-346 |
| Cow position: | chr18:49100672-49100384 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 68-347 |
| Cow position: | chr18:46108678-46108403 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 89 |
| Conread position: | 68-348 |
| Cow position: | chr18:45904192-45903908 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 68-349 |
| Cow position: | chr18:14048413-14048696 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 68-349 |
| Cow position: | chr18:28658214-28657924 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 68-349 |
| Cow position: | chr18:44484058-44483786 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 69-265 |
| Cow position: | chr18:7950814-7951010 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 28, 158 |
| Conread position: | 69-268 |
| Cow position: | chr18:6290485-6290685 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 69-271 |
| Cow position: | chr18:16044453-16044251 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 93 |
| Conread position: | 69-334 |
| Cow position: | chr18:29058794-29058522 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 92 |
| Conread position: | 69-345 |
| Cow position: | chr18:9089406-9089683 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 69-346 |
| Cow position: | chr18:12118144-12117864 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 164 |
| Conread position: | 69-348 |
| Cow position: | chr18:81457-81733 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 29, 125 |
| Conread position: | 69-348 |
| Cow position: | chr18:2849560-2849283 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 29, 189 |
| Conread position: | 69-349 |
| Cow position: | chr18:9365613-9365906 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 29, 218 |
| Conread position: | 69-349 |
| Cow position: | chr18:10656147-10656425 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 69-349 |
| Cow position: | chr18:11831839-11832107 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 69-349 |
| Cow position: | chr18:29958445-29958177 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 69-349 |
| Cow position: | chr18:45570722-45571001 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 29, 110 |
| Conread position: | 69-349 |
| Cow position: | chr18:55001038-55000754 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 69-351 |
| Cow position: | chr18:7964932-7965221 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 29, 158 |
| Conread position: | 69-351 |
| Cow position: | chr18:55552666-55552956 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 210 |
| Conread position: | 70-270 |
| Cow position: | chr18:13293212-13293410 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 70-272 |
| Cow position: | chr18:52635379-52635177 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 70-349 |
| Cow position: | chr18:50637761-50637484 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 197 |
| Conread position: | 70-350 |
| Cow position: | chr18:8105241-8104954 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 70-351 |
| Cow position: | chr18:52637827-52637540 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 28, 231 |
| Conread position: | 73-349 |
| Cow position: | chr18:23766709-23766423 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 6 |
| Conread position: | 75-265 |
| Cow position: | chr18:45572816-45573009 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 75-270 |
| Cow position: | chr18:13172816-13172616 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 75-270 |
| Cow position: | chr18:13359769-13359964 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 75-272 |
| Cow position: | chr18:7955855-7956045 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 75-272 |
| Cow position: | chr18:16045293-16045100 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 99 |
| Conread position: | 75-348 |
| Cow position: | chr18:16417989-16417716 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 23, 132 |
| Conread position: | 75-349 |
| Cow position: | chr18:6610151-6609871 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 75-349 |
| Cow position: | chr18:44802176-44801902 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 31 |
| Conread position: | 75-349 |
| Cow position: | chr18:47183578-47183306 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 122 |
| Conread position: | 76-269 |
| Cow position: | chr18:26335108-26334914 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 76-270 |
| Cow position: | chr18:268103-267915 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 76-273 |
| Cow position: | chr18:12113659-12113474 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 76-339 |
| Cow position: | chr18:47517500-47517239 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 77-269 |
| Cow position: | chr18:49161747-49161544 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 77-269 |
| Cow position: | chr18:51406194-51406009 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 77-270 |
| Cow position: | chr18:4666502-4666312 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 77-270 |
| Cow position: | chr18:56168210-56168019 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 77-273 |
| Cow position: | chr18:19850037-19849853 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 77-343 |
| Cow position: | chr18:55789283-55789013 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 21, 115 |
| Conread position: | 77-348 |
| Cow position: | chr18:37002338-37002618 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 77-349 |
| Cow position: | chr18:4796678-4796960 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 77-349 |
| Cow position: | chr18:9974616-9974341 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 77-349 |
| Cow position: | chr18:13508020-13507749 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 190, 22 |
| Conread position: | 77-349 |
| Cow position: | chr18:14815626-14815355 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 77-349 |
| Cow position: | chr18:33299607-33299891 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 135 |
| Conread position: | 77-349 |
| Cow position: | chr18:35012597-35012330 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 21, 118 |
| Conread position: | 77-349 |
| Cow position: | chr18:36458643-36458921 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 77-349 |
| Cow position: | chr18:55505110-55505394 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 77-349 |
| Cow position: | chr18:56181746-56181474 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 77-350 |
| Cow position: | chr18:3115169-3115441 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 77-350 |
| Cow position: | chr18:10575821-10576093 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 77-350 |
| Cow position: | chr18:56150947-56150655 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 234 |
| Conread position: | 78-270 |
| Cow position: | chr18:21721570-21721377 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 79-349 |
| Cow position: | chr18:56159176-56159449 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 81-255 |
| Cow position: | chr18:56163300-56163472 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 110 |
| Conread position: | 81-349 |
| Cow position: | chr18:39875546-39875272 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 82-348 |
| Cow position: | chr18:3180134-3180397 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 96 |
| Conread position: | 82-349 |
| Cow position: | chr18:31082606-31082361 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 16, 52 |
| Conread position: | 83-349 |
| Cow position: | chr18:28924117-28923860 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 84-265 |
| Cow position: | chr18:37023840-37023658 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 84-269 |
| Cow position: | chr18:19123891-19124078 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 14, 176 |
| Conread position: | 84-269 |
| Cow position: | chr18:31725168-31724979 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 129, 13 |
| Conread position: | 84-270 |
| Cow position: | chr18:20174414-20174229 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 84-270 |
| Cow position: | chr18:25282839-25282653 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 14, 96 |
| Conread position: | 84-270 |
| Cow position: | chr18:36445148-36445339 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 84-348 |
| Cow position: | chr18:44549191-44548926 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 84-349 |
| Cow position: | chr18:11867067-11867324 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 188, 15 |
| Conread position: | 84-349 |
| Cow position: | chr18:55498782-55499059 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 84-350 |
| Cow position: | chr18:49200356-49200621 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 191 |
| Conread position: | 84-351 |
| Cow position: | chr18:35636634-35636357 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 85-349 |
| Cow position: | chr18:11183659-11183929 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 88-270 |
| Cow position: | chr18:51656333-51656144 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 88-332 |
| Cow position: | chr18:25626745-25626992 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 10, 207 |
| Conread position: | 88-349 |
| Cow position: | chr18:38606956-38607214 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 59 |
| Conread position: | 88-349 |
| Cow position: | chr18:38686815-38687071 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 89-273 |
| Cow position: | chr18:31672785-31672607 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 89-328 |
| Cow position: | chr18:48290717-48290473 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 89-349 |
| Cow position: | chr18:6103393-6103110 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 116 |
| Conread position: | 89-349 |
| Cow position: | chr18:11691689-11691421 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 212 |
| Conread position: | 89-349 |
| Cow position: | chr18:56183659-56183922 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 90-270 |
| Cow position: | chr18:2592451-2592268 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 92-270 |
| Cow position: | chr18:3098589-3098418 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 78 |
| Conread position: | 92-346 |
| Cow position: | chr18:20641761-20641512 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 6, 98 |
| Conread position: | 92-349 |
| Cow position: | chr18:7649718-7649972 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 92-349 |
| Cow position: | chr18:33407335-33407604 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 96-269 |
| Cow position: | chr18:17004979-17005156 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 96-270 |
| Cow position: | chr18:5457531-5457366 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 96-334 |
| Cow position: | chr18:50381986-50382225 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 96-349 |
| Cow position: | chr18:48453422-48453675 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 96-351 |
| Cow position: | chr18:4884786-4884528 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 7, 145 |
| Conread position: | 98-270 |
| Cow position: | chr18:1582543-1582379 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 123, 30 |
| Conread position: | 98-272 |
| Cow position: | chr18:23447350-23447179 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 144 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 129, 78 |
| Conread position: | 98-273 |
| Cow position: | chr18:37382366-37382190 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 99-268 |
| Cow position: | chr18:47314561-47314391 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 99-269 |
| Cow position: | chr18:29796692-29796526 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 99-270 |
| Cow position: | chr18:5711934-5711767 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 128, 78 |
| Conread position: | 99-333 |
| Cow position: | chr18:33793441-33793675 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 128, 72 |
| Conread position: | 99-333 |
| Cow position: | chr18:43563960-43564197 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 99-348 |
| Cow position: | chr18:10954207-10954454 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 99-348 |
| Cow position: | chr18:50082512-50082271 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 187, 87 |
| Conread position: | 99-349 |
| Cow position: | chr18:30794167-30794416 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 77 |
| Conread position: | 99-349 |
| Cow position: | chr18:55461974-55461719 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 77, 50 |
| Conread position: | 100-349 |
| Cow position: | chr18:56172286-56172023 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 126, 89 |
| Conread position: | 101-351 |
| Cow position: | chr18:7952381-7952628 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 121, 90 |
| Conread position: | 101-351 |
| Cow position: | chr18:51827030-51827270 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 200, 67 |
| Conread position: | 102-269 |
| Cow position: | chr18:10322536-10322705 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 102-343 |
| Cow position: | chr18:4381030-4381275 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 169, 33 |
| Conread position: | 104-270 |
| Cow position: | chr18:35582364-35582201 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 109-349 |
| Cow position: | chr18:42431866-42431624 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 61 |
| Conread position: | 110-349 |
| Cow position: | chr18:11684732-11684969 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 132, 66 |
| Conread position: | 118-349 |
| Cow position: | chr18:32883053-32883294 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 51, 155 |
| Conread position: | 119-349 |
| Cow position: | chr18:20482121-20481895 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 138, 82 |
| Conread position: | 123-350 |
| Cow position: | chr18:3018322-3018087 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 145, 69 |
| Conread position: | 124-349 |
| Cow position: | chr18:17391216-17391006 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 124-351 |
| Cow position: | chr18:24946055-24945816 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 105, 145 |
| Conread position: | 127-347 |
| Cow position: | chr18:18592233-18592458 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 159, 99 |
| Conread position: | 130-255 |
| Cow position: | chr18:33882894-33882771 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 130-345 |
| Cow position: | chr18:42479828-42479603 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 132-270 |
| Cow position: | chr18:48829021-48828881 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 133-349 |
| Cow position: | chr18:10977444-10977223 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 129, 171 |
| Conread position: | 133-349 |
| Cow position: | chr18:33896656-33896437 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 114, 43 |
| Conread position: | 134-272 |
| Cow position: | chr18:219100-219236 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 36 |
| Conread position: | 143-349 |
| Cow position: | chr18:3211645-3211865 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 145-349 |
| Cow position: | chr18:2619418-2619226 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 78, 31 |
| Conread position: | 153-349 |
| Cow position: | chr18:1954807-1954602 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 153-349 |
| Cow position: | chr18:54056345-54056537 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 119, 39 |
| Conread position: | 172-349 |
| Cow position: | chr18:54111021-54111195 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 185-349 |
| Cow position: | chr18:28930814-28930649 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 5 |
| Conread position: | 194-343 |
| Cow position: | chr18:9066522-9066679 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 215-348 |
| Cow position: | chr18:22180927-22180794 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 11 |
Show alignments to all cow chromosomes.