Cow genome map
| Conread name: | End1-UMC-pd10en3-022-e09 |
| Conread position: | 1-269 |
| Cow position: | chr20:4205667-4205942 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 1-270 |
| Cow position: | chr20:37200067-37200334 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 9, 109 |
| Conread position: | 42-349 |
| Cow position: | chr20:14735426-14735734 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 135 |
| Conread position: | 44-349 |
| Cow position: | chr20:23846919-23846602 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 46-270 |
| Cow position: | chr20:7442371-7442152 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 131 |
| Conread position: | 47-349 |
| Cow position: | chr20:12420867-12420555 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 137 |
| Conread position: | 49-348 |
| Cow position: | chr20:14572600-14572303 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 130 |
| Conread position: | 50-349 |
| Cow position: | chr20:42459094-42458793 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 51-349 |
| Cow position: | chr20:14759906-14759602 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 46, 157 |
| Conread position: | 56-349 |
| Cow position: | chr20:38578993-38578697 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 57-349 |
| Cow position: | chr20:29844819-29845114 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 58-349 |
| Cow position: | chr20:22704052-22704358 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 9, 252 |
| Conread position: | 60-348 |
| Cow position: | chr20:23505596-23505890 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 136 |
| Conread position: | 63-268 |
| Cow position: | chr20:581150-580949 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 66-348 |
| Cow position: | chr20:40511984-40511694 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 32, 132 |
| Conread position: | 67-270 |
| Cow position: | chr20:4621565-4621369 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 31, 112 |
| Conread position: | 67-349 |
| Cow position: | chr20:33144777-33144490 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 68-270 |
| Cow position: | chr20:11923464-11923267 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 68-348 |
| Cow position: | chr20:12582172-12581892 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 69-268 |
| Cow position: | chr20:19313289-19313089 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 69-269 |
| Cow position: | chr20:33435389-33435192 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 69-270 |
| Cow position: | chr20:12334158-12334350 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 31, 102 |
| Conread position: | 69-272 |
| Cow position: | chr20:20353138-20352937 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 69-318 |
| Cow position: | chr20:10235628-10235879 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 203 |
| Conread position: | 69-347 |
| Cow position: | chr20:8703130-8702854 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 69-347 |
| Cow position: | chr20:9412272-9412549 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 210, 36 |
| Conread position: | 69-348 |
| Cow position: | chr20:39743090-39743372 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 171 |
| Conread position: | 69-349 |
| Cow position: | chr20:3502070-3502330 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 30, 117 |
| Conread position: | 69-349 |
| Cow position: | chr20:3607175-3606897 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 30 |
| Conread position: | 69-349 |
| Cow position: | chr20:12996233-12995942 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 29, 111 |
| Conread position: | 69-349 |
| Cow position: | chr20:20312961-20312684 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 29, 103 |
| Conread position: | 69-349 |
| Cow position: | chr20:32847128-32847408 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 111 |
| Conread position: | 69-349 |
| Cow position: | chr20:40423314-40423041 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 29, 110 |
| Conread position: | 69-351 |
| Cow position: | chr20:11341029-11340740 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 29, 275 |
| Conread position: | 69-351 |
| Cow position: | chr20:24398856-24398581 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 69-351 |
| Cow position: | chr20:31740439-31740154 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 70-349 |
| Cow position: | chr20:6258286-6257998 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 70-349 |
| Cow position: | chr20:17903933-17904222 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 27, 113 |
| Conread position: | 70-349 |
| Cow position: | chr20:26996311-26996593 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 29 |
| Conread position: | 70-351 |
| Cow position: | chr20:28982475-28982767 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 28, 111 |
| Conread position: | 71-349 |
| Cow position: | chr20:17845738-17846024 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 124 |
| Conread position: | 74-272 |
| Cow position: | chr20:16291252-16291449 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 24, 105 |
| Conread position: | 74-346 |
| Cow position: | chr20:40256751-40257030 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 75-269 |
| Cow position: | chr20:5025520-5025330 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 75-270 |
| Cow position: | chr20:5826719-5826916 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 75-270 |
| Cow position: | chr20:42469548-42469737 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 51 |
| Conread position: | 75-272 |
| Cow position: | chr20:19146652-19146852 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 75-345 |
| Cow position: | chr20:7426407-7426138 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 118 |
| Conread position: | 75-347 |
| Cow position: | chr20:19363580-19363301 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 212 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 75-348 |
| Cow position: | chr20:15549115-15548834 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 90 |
| Conread position: | 75-348 |
| Cow position: | chr20:39019478-39019758 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 75-349 |
| Cow position: | chr20:7756847-7756559 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 23, 103 |
| Conread position: | 75-349 |
| Cow position: | chr20:13967476-13967193 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 23, 104 |
| Conread position: | 75-349 |
| Cow position: | chr20:38817793-38818070 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 75-351 |
| Cow position: | chr20:13269407-13269686 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 75-351 |
| Cow position: | chr20:38768671-38768395 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 103 |
| Conread position: | 76-270 |
| Cow position: | chr20:35907262-35907076 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 76-345 |
| Cow position: | chr20:39398272-39398540 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 81 |
| Conread position: | 77-270 |
| Cow position: | chr20:23679362-23679172 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 20, 99 |
| Conread position: | 77-272 |
| Cow position: | chr20:17251495-17251693 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 153, 20 |
| Conread position: | 77-272 |
| Cow position: | chr20:30817321-30817512 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 77-272 |
| Cow position: | chr20:39415530-39415722 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 77-328 |
| Cow position: | chr20:39418110-39417857 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 77-349 |
| Cow position: | chr20:5702529-5702787 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 173 |
| Conread position: | 77-349 |
| Cow position: | chr20:6240745-6240457 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 239 |
| Conread position: | 77-349 |
| Cow position: | chr20:15235548-15235824 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 77-349 |
| Cow position: | chr20:24521535-24521812 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 77-349 |
| Cow position: | chr20:33363304-33363581 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 77-349 |
| Cow position: | chr20:34001612-34001326 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 21, 125 |
| Conread position: | 77-351 |
| Cow position: | chr20:19328184-19328453 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 77-351 |
| Cow position: | chr20:25009859-25009567 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 21, 157 |
| Conread position: | 78-260 |
| Cow position: | chr20:24902687-24902497 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 156 |
| Conread position: | 79-349 |
| Cow position: | chr20:8556484-8556206 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 20 |
| Conread position: | 82-272 |
| Cow position: | chr20:33176971-33177167 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 16, 114 |
| Conread position: | 82-349 |
| Cow position: | chr20:14806675-14806950 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 97 |
| Conread position: | 83-270 |
| Cow position: | chr20:27408082-27407899 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 84-263 |
| Cow position: | chr20:34251887-34251709 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 84-267 |
| Cow position: | chr20:34918070-34918244 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 84-269 |
| Cow position: | chr20:28296081-28296266 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 13, 81 |
| Conread position: | 84-270 |
| Cow position: | chr20:3331503-3331312 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 84-270 |
| Cow position: | chr20:20983798-20983972 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 84-270 |
| Cow position: | chr20:23936624-23936432 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 84-272 |
| Cow position: | chr20:9536925-9537114 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 84-347 |
| Cow position: | chr20:10818433-10818179 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 84-349 |
| Cow position: | chr20:3599599-3599332 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 84-349 |
| Cow position: | chr20:22235105-22235370 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 96 |
| Conread position: | 84-351 |
| Cow position: | chr20:28604997-28605275 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 13, 191 |
| Conread position: | 84-351 |
| Cow position: | chr20:40127545-40127278 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 14, 100 |
| Conread position: | 85-349 |
| Cow position: | chr20:8607127-8606865 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 99 |
| Conread position: | 85-350 |
| Cow position: | chr20:38415180-38414921 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 88-349 |
| Cow position: | chr20:22313360-22313097 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 179, 55 |
| Conread position: | 88-349 |
| Cow position: | chr20:38551169-38551435 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 89-270 |
| Cow position: | chr20:35958442-35958621 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 13, 88 |
| Conread position: | 89-270 |
| Cow position: | chr20:36331632-36331449 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 89-332 |
| Cow position: | chr20:7659416-7659171 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 183, 43 |
| Conread position: | 89-350 |
| Cow position: | chr20:5116508-5116249 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 9, 175 |
| Conread position: | 92-349 |
| Cow position: | chr20:398495-398243 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 63 |
| Conread position: | 95-343 |
| Cow position: | chr20:10200146-10200403 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 96-268 |
| Cow position: | chr20:35797410-35797582 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 131, 115 |
| Conread position: | 96-270 |
| Cow position: | chr20:35760475-35760645 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 5, 93 |
| Conread position: | 96-329 |
| Cow position: | chr20:25686547-25686304 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 169, 206 |
| Conread position: | 96-349 |
| Cow position: | chr20:14879592-14879852 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 178, 74 |
| Conread position: | 96-351 |
| Cow position: | chr20:23792408-23792669 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 97-272 |
| Cow position: | chr20:13994615-13994791 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 147 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 97-349 |
| Cow position: | chr20:28067620-28067356 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 164, 79 |
| Conread position: | 98-272 |
| Cow position: | chr20:19410562-19410387 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 70, 113 |
| Conread position: | 98-350 |
| Cow position: | chr20:10884559-10884293 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 99-268 |
| Cow position: | chr20:6602849-6603013 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 99-270 |
| Cow position: | chr20:3781618-3781451 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 99-270 |
| Cow position: | chr20:11043688-11043527 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 99-343 |
| Cow position: | chr20:18423529-18423758 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 99-349 |
| Cow position: | chr20:18320987-18320728 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 100-349 |
| Cow position: | chr20:8578053-8578312 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 166, 198 |
| Conread position: | 101-349 |
| Cow position: | chr20:32084274-32084016 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 166, 22 |
| Conread position: | 103-349 |
| Cow position: | chr20:36207614-36207877 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 166, 121 |
| Conread position: | 105-270 |
| Cow position: | chr20:24391794-24391955 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 131, 115 |
| Conread position: | 105-334 |
| Cow position: | chr20:37165540-37165762 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 158, 61 |
| Conread position: | 107-349 |
| Cow position: | chr20:14980698-14980446 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 165, 6 |
| Conread position: | 107-351 |
| Cow position: | chr20:11864320-11864068 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 119, 75 |
| Conread position: | 113-272 |
| Cow position: | chr20:37272538-37272691 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 29 |
| Conread position: | 118-350 |
| Cow position: | chr20:16935476-16935246 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 119-351 |
| Cow position: | chr20:3740172-3739939 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 47 |
| Conread position: | 121-270 |
| Cow position: | chr20:3321308-3321166 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 121-300 |
| Cow position: | chr20:3254878-3255062 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 122-272 |
| Cow position: | chr20:28831794-28831946 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 123-348 |
| Cow position: | chr20:7210867-7211102 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 11, 200 |
| Conread position: | 123-349 |
| Cow position: | chr20:7439017-7438788 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 149, 25 |
| Conread position: | 124-351 |
| Cow position: | chr20:5814401-5814632 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 170 |
| Conread position: | 127-349 |
| Cow position: | chr20:13652521-13652304 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 103, 36 |
| Conread position: | 131-270 |
| Cow position: | chr20:9701735-9701601 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 132-270 |
| Cow position: | chr20:18837320-18837181 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 136-347 |
| Cow position: | chr20:8307858-8308081 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 113, 166 |
| Conread position: | 139-272 |
| Cow position: | chr20:30710802-30710667 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 142-272 |
| Cow position: | chr20:41309387-41309515 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 142-349 |
| Cow position: | chr20:5636331-5636544 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 143, 132 |
| Conread position: | 145-265 |
| Cow position: | chr20:9729939-9730056 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 145-272 |
| Cow position: | chr20:39247763-39247888 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 147-349 |
| Cow position: | chr20:2298926-2298723 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 135 |
| Conread position: | 147-349 |
| Cow position: | chr20:4334664-4334467 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 125, 44 |
| Conread position: | 147-349 |
| Cow position: | chr20:14917156-14917348 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 83, 27 |
| Conread position: | 147-351 |
| Cow position: | chr20:41089938-41089727 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 127, 94 |
| Conread position: | 149-319 |
| Cow position: | chr20:14433570-14433403 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 150-349 |
| Cow position: | chr20:13025752-13025551 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 6, 26 |
| Conread position: | 166-349 |
| Cow position: | chr20:25162257-25162062 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 77, 138 |
| Conread position: | 172-349 |
| Cow position: | chr20:35407740-35407915 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 174-349 |
| Cow position: | chr20:8546945-8547131 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 136 |
| Conread position: | 176-346 |
| Cow position: | chr20:25657929-25657767 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 179-345 |
| Cow position: | chr20:38431111-38430947 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 195-346 |
| Cow position: | chr20:23286423-23286271 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 101 |
Show alignments to all cow chromosomes.