Cow genome map
| Conread name: | End1-UMC-pd10en3-022-e09 |
| Conread position: | 4-343 |
| Cow position: | chr29:5099096-5098754 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 191 |
| Conread position: | 5-228 |
| Cow position: | chr29:2885769-2885564 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 5-273 |
| Cow position: | chr29:4065755-4066020 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 127 |
| Conread position: | 27-348 |
| Cow position: | chr29:32767825-32767515 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 207, 46 |
| Conread position: | 27-349 |
| Cow position: | chr29:41530542-41530868 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 35-349 |
| Cow position: | chr29:23154954-23155246 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 37-349 |
| Cow position: | chr29:12784254-12783942 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 43-268 |
| Cow position: | chr29:22175399-22175616 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 45-348 |
| Cow position: | chr29:94837-94540 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 61 |
| Conread position: | 49-349 |
| Cow position: | chr29:109422-109714 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 54-351 |
| Cow position: | chr29:21933396-21933101 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 43, 130 |
| Conread position: | 62-351 |
| Cow position: | chr29:13615918-13615629 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 63-349 |
| Cow position: | chr29:12679882-12680174 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 63-349 |
| Cow position: | chr29:40117292-40117590 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 145 |
| Conread position: | 65-269 |
| Cow position: | chr29:37292505-37292709 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 132 |
| Conread position: | 67-269 |
| Cow position: | chr29:45650612-45650413 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 67-270 |
| Cow position: | chr29:6217818-6217617 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 67-343 |
| Cow position: | chr29:4480442-4480158 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 42 |
| Conread position: | 67-349 |
| Cow position: | chr29:17109700-17109978 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 112 |
| Conread position: | 67-349 |
| Cow position: | chr29:39567418-39567704 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 68-269 |
| Cow position: | chr29:44901971-44901774 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 68-270 |
| Cow position: | chr29:6844898-6844697 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 68-349 |
| Cow position: | chr29:9709430-9709713 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 69-269 |
| Cow position: | chr29:3395842-3396036 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 69-269 |
| Cow position: | chr29:34745922-34745731 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 69-270 |
| Cow position: | chr29:6925754-6925943 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 69-270 |
| Cow position: | chr29:28775722-28775526 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 98 |
| Conread position: | 69-272 |
| Cow position: | chr29:26771173-26771367 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 69-308 |
| Cow position: | chr29:17135583-17135814 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 69-325 |
| Cow position: | chr29:35636156-35636426 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 69-326 |
| Cow position: | chr29:15944301-15944555 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 69-348 |
| Cow position: | chr29:4328166-4328435 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 69-348 |
| Cow position: | chr29:35501916-35501637 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 69-349 |
| Cow position: | chr29:17373-17089 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 69-349 |
| Cow position: | chr29:11136156-11135876 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 69-349 |
| Cow position: | chr29:18748852-18748584 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 69-349 |
| Cow position: | chr29:36216850-36217133 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 69-350 |
| Cow position: | chr29:26130515-26130792 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 29, 151 |
| Conread position: | 69-351 |
| Cow position: | chr29:87285-86991 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 69-351 |
| Cow position: | chr29:465670-465379 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 29, 166 |
| Conread position: | 69-351 |
| Cow position: | chr29:1933826-1933551 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 31, 110 |
| Conread position: | 69-351 |
| Cow position: | chr29:2744540-2744247 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 70-334 |
| Cow position: | chr29:28195786-28195512 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 74-265 |
| Cow position: | chr29:18212245-18212065 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 75-269 |
| Cow position: | chr29:24952424-24952618 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 75-272 |
| Cow position: | chr29:26335640-26335443 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 24, 106 |
| Conread position: | 75-272 |
| Cow position: | chr29:26980133-26980332 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 75-273 |
| Cow position: | chr29:31926552-31926355 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 75-346 |
| Cow position: | chr29:32290340-32290624 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 103 |
| Conread position: | 75-351 |
| Cow position: | chr29:20674068-20673790 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 77-270 |
| Cow position: | chr29:19338719-19338918 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 21, 154 |
| Conread position: | 77-270 |
| Cow position: | chr29:28868371-28868567 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 77-272 |
| Cow position: | chr29:26519721-26519528 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 78 |
| Conread position: | 77-321 |
| Cow position: | chr29:37785439-37785182 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 77-325 |
| Cow position: | chr29:20933445-20933700 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 77-334 |
| Cow position: | chr29:26734773-26735032 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 77-347 |
| Cow position: | chr29:40165982-40166260 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 77-349 |
| Cow position: | chr29:10456812-10456544 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 77-349 |
| Cow position: | chr29:13372403-13372682 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 111 |
| Conread position: | 77-349 |
| Cow position: | chr29:19762012-19762289 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 77-349 |
| Cow position: | chr29:29589177-29588908 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 172 |
| Conread position: | 77-349 |
| Cow position: | chr29:41811837-41811569 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 77-351 |
| Cow position: | chr29:19389226-19389498 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 68 |
| Conread position: | 77-351 |
| Cow position: | chr29:36530603-36530887 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 230 |
| Conread position: | 78-349 |
| Cow position: | chr29:29769605-29769333 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 79-346 |
| Cow position: | chr29:39111565-39111296 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 82-269 |
| Cow position: | chr29:4691941-4691748 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 151 |
| Conread position: | 83-269 |
| Cow position: | chr29:24345718-24345520 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 83-347 |
| Cow position: | chr29:5892593-5892861 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 124 |
| Conread position: | 83-351 |
| Cow position: | chr29:19254073-19253809 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 143, 5 |
| Conread position: | 84-255 |
| Cow position: | chr29:27009165-27009338 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 84-269 |
| Cow position: | chr29:25333706-25333532 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 84-270 |
| Cow position: | chr29:4194374-4194186 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 84-271 |
| Cow position: | chr29:26334642-26334456 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 84-272 |
| Cow position: | chr29:2415064-2414881 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 84-272 |
| Cow position: | chr29:22936028-22936203 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 84-332 |
| Cow position: | chr29:40891955-40891695 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 195 |
| Conread position: | 84-347 |
| Cow position: | chr29:26778631-26778899 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 84-347 |
| Cow position: | chr29:32963301-32963565 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 14, 148 |
| Conread position: | 84-349 |
| Cow position: | chr29:8926712-8926443 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 84-349 |
| Cow position: | chr29:31928726-31929007 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 85-269 |
| Cow position: | chr29:8125845-8125661 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-347 |
| Cow position: | chr29:29974789-29975054 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 12, 60 |
| Conread position: | 87-349 |
| Cow position: | chr29:26615975-26615702 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 88-268 |
| Cow position: | chr29:11915568-11915749 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 10, 6 |
| Conread position: | 88-269 |
| Cow position: | chr29:17222159-17222343 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 88-349 |
| Cow position: | chr29:29056935-29057197 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 53 |
| Conread position: | 89-270 |
| Cow position: | chr29:12798682-12798850 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 89-343 |
| Cow position: | chr29:10659595-10659340 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 17, 190 |
| Conread position: | 89-347 |
| Cow position: | chr29:11562366-11562629 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 9, 107 |
| Conread position: | 89-349 |
| Cow position: | chr29:17409082-17409353 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 106 |
| Conread position: | 89-351 |
| Cow position: | chr29:3502813-3503062 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 92-269 |
| Cow position: | chr29:44378663-44378485 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 6, 85 |
| Conread position: | 92-327 |
| Cow position: | chr29:3704448-3704202 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 5, 91 |
| Conread position: | 92-335 |
| Cow position: | chr29:20903533-20903280 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 6, 140 |
| Conread position: | 92-349 |
| Cow position: | chr29:35291854-35292110 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 6, 75 |
| Conread position: | 96-272 |
| Cow position: | chr29:3711146-3711323 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 97-272 |
| Cow position: | chr29:23697740-23697912 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 126, 79 |
| Conread position: | 97-349 |
| Cow position: | chr29:13639605-13639349 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 175, 66 |
| Conread position: | 98-265 |
| Cow position: | chr29:868535-868701 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 120, 95 |
| Conread position: | 98-272 |
| Cow position: | chr29:42886143-42886320 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 98-351 |
| Cow position: | chr29:699852-699595 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 128, 25 |
| Conread position: | 98-351 |
| Cow position: | chr29:3502319-3502591 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 141 |
| Conread position: | 98-351 |
| Cow position: | chr29:19792517-19792256 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 99-269 |
| Cow position: | chr29:16309514-16309672 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 99-270 |
| Cow position: | chr29:11787556-11787727 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 99-270 |
| Cow position: | chr29:36183039-36183212 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 113, 46 |
| Conread position: | 99-334 |
| Cow position: | chr29:21000405-21000636 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 43 |
| Conread position: | 99-348 |
| Cow position: | chr29:17668259-17668508 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 171, 124 |
| Conread position: | 99-349 |
| Cow position: | chr29:4520099-4520358 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 77 |
| Conread position: | 99-349 |
| Cow position: | chr29:22162487-22162231 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 78 |
| Conread position: | 99-349 |
| Cow position: | chr29:22714964-22714705 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 173, 250 |
| Conread position: | 99-349 |
| Cow position: | chr29:24578640-24578881 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 99-349 |
| Cow position: | chr29:25737652-25737396 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 78 |
| Conread position: | 99-351 |
| Cow position: | chr29:24119973-24119720 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 132, 95 |
| Conread position: | 99-351 |
| Cow position: | chr29:25474671-25474943 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 131, 233 |
| Conread position: | 99-351 |
| Cow position: | chr29:34773964-34773717 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 172, 54 |
| Conread position: | 100-273 |
| Cow position: | chr29:35459006-35458844 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 100-340 |
| Cow position: | chr29:24103784-24103530 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 101-351 |
| Cow position: | chr29:22613198-22613450 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 168, 6 |
| Conread position: | 102-348 |
| Cow position: | chr29:45005852-45005610 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 164, 55 |
| Conread position: | 103-312 |
| Cow position: | chr29:43495827-43496035 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 154, 85 |
| Conread position: | 105-347 |
| Cow position: | chr29:39642946-39643192 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 116, 64 |
| Conread position: | 110-348 |
| Cow position: | chr29:38580752-38580997 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 158, 9 |
| Conread position: | 115-347 |
| Cow position: | chr29:463874-463638 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 115, 62 |
| Conread position: | 118-349 |
| Cow position: | chr29:28446477-28446231 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 154, 170 |
| Conread position: | 122-270 |
| Cow position: | chr29:22778395-22778246 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 122-347 |
| Cow position: | chr29:732404-732637 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 141, 91 |
| Conread position: | 123-270 |
| Cow position: | chr29:6337450-6337592 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 99, 53 |
| Conread position: | 128-271 |
| Cow position: | chr29:41364902-41365044 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 101, 40 |
| Conread position: | 133-341 |
| Cow position: | chr29:43009287-43009074 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 139, 56 |
| Conread position: | 136-349 |
| Cow position: | chr29:9718972-9718749 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 112, 167 |
| Conread position: | 137-267 |
| Cow position: | chr29:28979678-28979553 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 84, 29 |
| Conread position: | 142-351 |
| Cow position: | chr29:3100455-3100247 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 82, 153 |
| Conread position: | 144-329 |
| Cow position: | chr29:25091916-25092112 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 7, 159 |
| Conread position: | 145-347 |
| Cow position: | chr29:5186689-5186477 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 103, 90 |
| Conread position: | 145-349 |
| Cow position: | chr29:32211250-32211048 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 147-349 |
| Cow position: | chr29:4334539-4334744 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 80, 16 |
| Conread position: | 147-349 |
| Cow position: | chr29:39329786-39329585 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 153-349 |
| Cow position: | chr29:41113043-41112861 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 153-351 |
| Cow position: | chr29:12900734-12900531 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 167-345 |
| Cow position: | chr29:27826353-27826537 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 128 |
| Conread position: | 182-351 |
| Cow position: | chr29:26416203-26416374 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 183-351 |
| Cow position: | chr29:25814991-25814816 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 110 |
| Conread position: | 183-351 |
| Cow position: | chr29:28396532-28396711 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 189-349 |
| Cow position: | chr29:31943728-31943884 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 14, 76 |
Show alignments to all cow chromosomes.