• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
End1-UMC-pd10en3-022-e09
        

               
Conread position:
               
19-347
               

               
Cow position:
               
chr5:33537595-33537912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
34-349
               

               
Cow position:
               
chr5:34300649-34300965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 116
               

               
Conread position:
               
35-255
               

               
Cow position:
               
chr5:6032963-6033183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 135
               

               
Conread position:
               
35-347
               

               
Cow position:
               
chr5:32339250-32338922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 274
               

               
Conread position:
               
37-269
               

               
Cow position:
               
chr5:58144880-58144644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 146
               

               
Conread position:
               
41-270
               

               
Cow position:
               
chr5:11668447-11668227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
57, 136
               

               
Conread position:
               
46-349
               

               
Cow position:
               
chr5:31918389-31918689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 127
               

               
Conread position:
               
47-253
               

               
Cow position:
               
chr5:62261612-62261807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
47-270
               

               
Cow position:
               
chr5:37814360-37814580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 132
               

               
Conread position:
               
49-277
               

               
Cow position:
               
chr5:24642983-24642761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
49-349
               

               
Cow position:
               
chr5:42744536-42744832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
221, 50
               

               
Conread position:
               
51-346
               

               
Cow position:
               
chr5:1344117-1343807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
52-261
               

               
Cow position:
               
chr5:32963885-32963681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
52-268
               

               
Cow position:
               
chr5:4032247-4032036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
53-267
               

               
Cow position:
               
chr5:43992068-43992277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
54-268
               

               
Cow position:
               
chr5:22839729-22839516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
43, 94
               

               
Conread position:
               
55-349
               

               
Cow position:
               
chr5:21964038-21964335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr5:34115411-34115608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr5:37645823-37646032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
59-349
               

               
Cow position:
               
chr5:53835464-53835763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
59-349
               

               
Cow position:
               
chr5:67243673-67243967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 199
               

               
Conread position:
               
62-329
               

               
Cow position:
               
chr5:40928221-40927952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
62-351
               

               
Cow position:
               
chr5:40109253-40109541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
64-349
               

               
Cow position:
               
chr5:69337586-69337866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 32
               

               
Conread position:
               
65-270
               

               
Cow position:
               
chr5:40357114-40356907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
65-347
               

               
Cow position:
               
chr5:42667633-42667343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
66-318
               

               
Cow position:
               
chr5:17999738-17999487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
67-349
               

               
Cow position:
               
chr5:37646795-37646497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
67-349
               

               
Cow position:
               
chr5:62172174-62172458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
68-269
               

               
Cow position:
               
chr5:50729253-50729457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 111
               

               
Conread position:
               
68-270
               

               
Cow position:
               
chr5:30487006-30487195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
68-272
               

               
Cow position:
               
chr5:47313231-47313436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
68-327
               

               
Cow position:
               
chr5:28330574-28330320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
69-266
               

               
Cow position:
               
chr5:50722809-50723003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
69-269
               

               
Cow position:
               
chr5:24348870-24349065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
69-269
               

               
Cow position:
               
chr5:38853118-38853323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
69-269
               

               
Cow position:
               
chr5:47317209-47317014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
69-269
               

               
Cow position:
               
chr5:55756683-55756468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
69-269
               

               
Cow position:
               
chr5:63840387-63840187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 131
               

               
Conread position:
               
69-270
               

               
Cow position:
               
chr5:16508855-16509054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
69-270
               

               
Cow position:
               
chr5:43858669-43858475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
69-270
               

               
Cow position:
               
chr5:50950312-50950512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
69-272
               

               
Cow position:
               
chr5:21944140-21944357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
69-324
               

               
Cow position:
               
chr5:31469824-31469573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
69-334
               

               
Cow position:
               
chr5:43474606-43474876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
69-344
               

               
Cow position:
               
chr5:28302981-28302704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
69-344
               

               
Cow position:
               
chr5:50637590-50637867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
69-345
               

               
Cow position:
               
chr5:34915901-34916173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
69-348
               

               
Cow position:
               
chr5:16206383-16206107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr5:6045045-6045340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 245
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr5:20407904-20407632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 29
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr5:27015451-27015726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr5:29827812-29828093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr5:34528320-34528597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr5:35826349-35826648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 240
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr5:43929975-43929688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr5:47601576-47601858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr5:56467463-56467737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr5:57935355-57935062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr5:66366290-66366556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
69-350
               

               
Cow position:
               
chr5:18702454-18702173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 197
               

               
Conread position:
               
69-350
               

               
Cow position:
               
chr5:21524923-21525207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 211
               

               
Conread position:
               
69-351
               

               
Cow position:
               
chr5:4797552-4797275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
69-351
               

               
Cow position:
               
chr5:34049868-34050166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 115
               

               
Conread position:
               
69-351
               

               
Cow position:
               
chr5:40889525-40889249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
70-270
               

               
Cow position:
               
chr5:26377907-26377711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
70-270
               

               
Cow position:
               
chr5:63917650-63917452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
70-347
               

               
Cow position:
               
chr5:64139323-64139604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
70-348
               

               
Cow position:
               
chr5:4166430-4166687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
70-348
               

               
Cow position:
               
chr5:61725730-61726012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 150
               

               
Conread position:
               
70-349
               

               
Cow position:
               
chr5:58793855-58793561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
70-351
               

               
Cow position:
               
chr5:65601220-65601505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
72-270
               

               
Cow position:
               
chr5:36854974-36855163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
72-348
               

               
Cow position:
               
chr5:4710380-4710106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
73-343
               

               
Cow position:
               
chr5:32697050-32696782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
73-349
               

               
Cow position:
               
chr5:24996461-24996176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
75-269
               

               
Cow position:
               
chr5:44583353-44583171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
75-270
               

               
Cow position:
               
chr5:45036785-45036979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
75-271
               

               
Cow position:
               
chr5:65776621-65776423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
75-334
               

               
Cow position:
               
chr5:65588477-65588734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
196, 24
               

               
Conread position:
               
75-348
               

               
Cow position:
               
chr5:56523939-56524219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
75-349
               

               
Cow position:
               
chr5:21040209-21039932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
75-349
               

               
Cow position:
               
chr5:30253508-30253787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 55
               

               
Conread position:
               
75-349
               

               
Cow position:
               
chr5:44054273-44054007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
75-349
               

               
Cow position:
               
chr5:66338849-66339125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
75-349
               

               
Cow position:
               
chr5:70050517-70050788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
75-349
               

               
Cow position:
               
chr5:74643896-74643631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
76-270
               

               
Cow position:
               
chr5:26990159-26990350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
76-348
               

               
Cow position:
               
chr5:9090257-9089978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
76-349
               

               
Cow position:
               
chr5:20783394-20783666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
191, 23
               

               
Conread position:
               
77-265
               

               
Cow position:
               
chr5:48178909-48178723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
77-270
               

               
Cow position:
               
chr5:65933161-65932970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
77-271
               

               
Cow position:
               
chr5:61576306-61576503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
77-272
               

               
Cow position:
               
chr5:15462485-15462675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
77-272
               

               
Cow position:
               
chr5:16184856-16185047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
77-272
               

               
Cow position:
               
chr5:39094320-39094515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
77-272
               

               
Cow position:
               
chr5:42747925-42748117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
77-332
               

               
Cow position:
               
chr5:56135202-56134935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
77-332
               

               
Cow position:
               
chr5:62826986-62826723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
77-338
               

               
Cow position:
               
chr5:49558926-49559216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
21, 109
               

               
Conread position:
               
77-348
               

               
Cow position:
               
chr5:35208028-35208309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
21, 151
               

               
Conread position:
               
77-348
               

               
Cow position:
               
chr5:61839955-61840233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr5:30276462-30276736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr5:34638652-34638930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr5:41164855-41165134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr5:45845928-45845645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 232
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr5:63987680-63987399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr5:66257409-66257685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr5:67212145-67212407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
21, 150
               

               
Conread position:
               
77-351
               

               
Cow position:
               
chr5:26094402-26094118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
77-351
               

               
Cow position:
               
chr5:27403477-27403181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
77-351
               

               
Cow position:
               
chr5:56443043-56443323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
79-351
               

               
Cow position:
               
chr5:56070622-56070907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
81-270
               

               
Cow position:
               
chr5:741178-740982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
81-270
               

               
Cow position:
               
chr5:52165411-52165220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
81-270
               

               
Cow position:
               
chr5:73252867-73253050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
81-343
               

               
Cow position:
               
chr5:19278921-19278667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
82-270
               

               
Cow position:
               
chr5:67932688-67932506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
82-273
               

               
Cow position:
               
chr5:58855876-58856065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
82-350
               

               
Cow position:
               
chr5:22243013-22242725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
83-272
               

               
Cow position:
               
chr5:24616346-24616155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
84-249
               

               
Cow position:
               
chr5:50975661-50975829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
84-265
               

               
Cow position:
               
chr5:30639076-30638905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
84-267
               

               
Cow position:
               
chr5:31434039-31434220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
84-267
               

               
Cow position:
               
chr5:56433575-56433759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr5:46104162-46103982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr5:46122575-46122392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr5:51999993-52000180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr5:56820486-56820304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr5:60519940-60520120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
84-272
               

               
Cow position:
               
chr5:45226050-45225864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
84-272
               

               
Cow position:
               
chr5:55176663-55176850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
84-327
               

               
Cow position:
               
chr5:23140799-23140557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
84-333
               

               
Cow position:
               
chr5:28927819-28927556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
14, 222
               

               
Conread position:
               
84-349
               

               
Cow position:
               
chr5:7193206-7193465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
84-349
               

               
Cow position:
               
chr5:15598460-15598189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 112
               

               
Conread position:
               
84-349
               

               
Cow position:
               
chr5:25035453-25035209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
84-349
               

               
Cow position:
               
chr5:29903748-29903477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
84-349
               

               
Cow position:
               
chr5:30302672-30302940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
84-349
               

               
Cow position:
               
chr5:31640201-31640471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
14, 159
               

               
Conread position:
               
84-349
               

               
Cow position:
               
chr5:39447758-39447489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
84-349
               

               
Cow position:
               
chr5:43457742-43457486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
84-349
               

               
Cow position:
               
chr5:55068490-55068752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
84-349
               

               
Cow position:
               
chr5:65887240-65886964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 192
               

               
Conread position:
               
84-351
               

               
Cow position:
               
chr5:28926411-28926132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
84-351
               

               
Cow position:
               
chr5:33414631-33414360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
85-341
               

               
Cow position:
               
chr5:19813437-19813182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
85-348
               

               
Cow position:
               
chr5:64176346-64176081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 188
               

               
Conread position:
               
85-349
               

               
Cow position:
               
chr5:1779486-1779239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr5:72564540-72564720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 105
               

               
Conread position:
               
88-342
               

               
Cow position:
               
chr5:51490976-51490725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
88-344
               

               
Cow position:
               
chr5:20779602-20779354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
88-345
               

               
Cow position:
               
chr5:68718661-68718912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
88-346
               

               
Cow position:
               
chr5:44994259-44993997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
88-347
               

               
Cow position:
               
chr5:48757722-48757984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
88-349
               

               
Cow position:
               
chr5:11229896-11229625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
88-349
               

               
Cow position:
               
chr5:14314300-14314574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 211
               

               
Conread position:
               
88-349
               

               
Cow position:
               
chr5:15722276-15722028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
88-349
               

               
Cow position:
               
chr5:60715577-60715320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
88-349
               

               
Cow position:
               
chr5:65752634-65752906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
89-267
               

               
Cow position:
               
chr5:37366676-37366856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
89-269
               

               
Cow position:
               
chr5:3771625-3771805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
89-269
               

               
Cow position:
               
chr5:14415552-14415736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
89-337
               

               
Cow position:
               
chr5:19470404-19470156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
169, 10
               

               
Conread position:
               
89-343
               

               
Cow position:
               
chr5:16025682-16025420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
89-346
               

               
Cow position:
               
chr5:74015719-74015985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
89-348
               

               
Cow position:
               
chr5:56028751-56028494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 181
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr5:5111298-5111028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr5:30844890-30845159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr5:39258320-39258554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr5:50533605-50533338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
91-272
               

               
Cow position:
               
chr5:32140926-32140749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
91-349
               

               
Cow position:
               
chr5:65941473-65941204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 207
               

               
Conread position:
               
92-349
               

               
Cow position:
               
chr5:21617237-21617504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
6, 87
               

               
Conread position:
               
92-349
               

               
Cow position:
               
chr5:21828646-21828914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 96
               

               
Conread position:
               
92-351
               

               
Cow position:
               
chr5:63964391-63964121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
94-327
               

               
Cow position:
               
chr5:44049488-44049726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
96-348
               

               
Cow position:
               
chr5:12323014-12322759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
97-349
               

               
Cow position:
               
chr5:56518421-56518176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
197, 79
               

               
Conread position:
               
98-270
               

               
Cow position:
               
chr5:29212738-29212902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
120, 69
               

               
Conread position:
               
98-272
               

               
Cow position:
               
chr5:11427452-11427275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
98-272
               

               
Cow position:
               
chr5:71158474-71158301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
98-349
               

               
Cow position:
               
chr5:31144986-31144741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
98-351
               

               
Cow position:
               
chr5:64137041-64137304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
99-268
               

               
Cow position:
               
chr5:55821158-55821330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
99-269
               

               
Cow position:
               
chr5:47547926-47547760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 24
               

               
Conread position:
               
99-270
               

               
Cow position:
               
chr5:35235918-35235751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
99-270
               

               
Cow position:
               
chr5:62142461-62142628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 77
               

               
Conread position:
               
99-318
               

               
Cow position:
               
chr5:63185463-63185237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
99-329
               

               
Cow position:
               
chr5:43395347-43395123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
99-345
               

               
Cow position:
               
chr5:64823522-64823269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 93
               

               
Conread position:
               
99-346
               

               
Cow position:
               
chr5:46510076-46509822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
173, 94
               

               
Conread position:
               
99-346
               

               
Cow position:
               
chr5:55967092-55966837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
99-347
               

               
Cow position:
               
chr5:26467411-26467670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
99-348
               

               
Cow position:
               
chr5:41546103-41545848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr5:40039980-40039722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
173, 95
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr5:60126164-60126419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
167, 67
               

               
Conread position:
               
100-270
               

               
Cow position:
               
chr5:7140313-7140150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
121, 66
               

               
Conread position:
               
100-273
               

               
Cow position:
               
chr5:57271473-57271304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
100-349
               

               
Cow position:
               
chr5:8821220-8820966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
150, 203
               

               
Conread position:
               
101-347
               

               
Cow position:
               
chr5:7044918-7044661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
103-270
               

               
Cow position:
               
chr5:75828940-75828778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
104-351
               

               
Cow position:
               
chr5:35449049-35449284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
105-349
               

               
Cow position:
               
chr5:23169022-23168780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
141, 63
               

               
Conread position:
               
106-351
               

               
Cow position:
               
chr5:50599854-50600095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
112-348
               

               
Cow position:
               
chr5:34561812-34562061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
154, 193
               

               
Conread position:
               
113-330
               

               
Cow position:
               
chr5:69731322-69731533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
155, 53
               

               
Conread position:
               
113-349
               

               
Cow position:
               
chr5:44447082-44446819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
57, 206
               

               
Conread position:
               
114-269
               

               
Cow position:
               
chr5:53146080-53145928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
116-270
               

               
Cow position:
               
chr5:50870349-50870504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
118-346
               

               
Cow position:
               
chr5:4220790-4221021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
169, 153
               

               
Conread position:
               
118-349
               

               
Cow position:
               
chr5:69461144-69461379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
119-351
               

               
Cow position:
               
chr5:52040509-52040275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
122-272
               

               
Cow position:
               
chr5:17644842-17644695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
124-347
               

               
Cow position:
               
chr5:6670382-6670149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
133, 179
               

               
Conread position:
               
124-349
               

               
Cow position:
               
chr5:46512951-46512722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
126-270
               

               
Cow position:
               
chr5:57576031-57576174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
126-344
               

               
Cow position:
               
chr5:17768326-17768109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
127-270
               

               
Cow position:
               
chr5:39242371-39242236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
130-349
               

               
Cow position:
               
chr5:44028480-44028257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
131-327
               

               
Cow position:
               
chr5:28957794-28957590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 176
               

               
Conread position:
               
131-339
               

               
Cow position:
               
chr5:6286604-6286397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
133-342
               

               
Cow position:
               
chr5:69520715-69520930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
134-349
               

               
Cow position:
               
chr5:29980160-29979936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
142-326
               

               
Cow position:
               
chr5:41010163-41009970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
115, 164
               

               
Conread position:
               
142-349
               

               
Cow position:
               
chr5:30950086-30949869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
124, 161
               

               
Conread position:
               
142-349
               

               
Cow position:
               
chr5:56014568-56014777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 44
               

               
Conread position:
               
145-270
               

               
Cow position:
               
chr5:54060110-54060235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
145-349
               

               
Cow position:
               
chr5:14629979-14629764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
146-270
               

               
Cow position:
               
chr5:21920205-21920333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
147-349
               

               
Cow position:
               
chr5:55955744-55955954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
138, 72
               

               
Conread position:
               
148-272
               

               
Cow position:
               
chr5:71579013-71579135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
148-347
               

               
Cow position:
               
chr5:45397418-45397617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
148-349
               

               
Cow position:
               
chr5:46426011-46425809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
154-270
               

               
Cow position:
               
chr5:66972269-66972386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
157-272
               

               
Cow position:
               
chr5:61049204-61049324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
163-269
               

               
Cow position:
               
chr5:54750687-54750794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
164-349
               

               
Cow position:
               
chr5:57101923-57101733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
164-351
               

               
Cow position:
               
chr5:50972382-50972578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
166-348
               

               
Cow position:
               
chr5:33552555-33552378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
167-349
               

               
Cow position:
               
chr5:70952021-70951834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
167-351
               

               
Cow position:
               
chr5:56877343-56877529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
171-349
               

               
Cow position:
               
chr5:7755703-7755523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
101, 139
               

               
Conread position:
               
174-346
               

               
Cow position:
               
chr5:7921540-7921361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 102
               

               
Conread position:
               
178-349
               

               
Cow position:
               
chr5:991332-991510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
182-349
               

               
Cow position:
               
chr5:44726456-44726288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
90, 103
               

               
Conread position:
               
184-349
               

               
Cow position:
               
chr5:49474670-49474499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
194-349
               

               
Cow position:
               
chr5:49440990-49440825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
200-349
               

               
Cow position:
               
chr5:7697893-7698046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               
Show alignments to all cow chromosomes.