Cow genome map
| Conread name: | End1-UMC-pd3end2-002-d02 |
| Conread position: | 1-241 |
| Cow position: | chr11:37304453-37304209 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 17-241 |
| Cow position: | chr11:68130642-68130422 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 19-308 |
| Cow position: | chr11:58399577-58399287 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 35 |
| Conread position: | 23-296 |
| Cow position: | chr11:58139937-58139661 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 23-308 |
| Cow position: | chr11:13087420-13087712 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 46, 260 |
| Conread position: | 23-308 |
| Cow position: | chr11:30057446-30057162 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 23-308 |
| Cow position: | chr11:69402974-69403266 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 23-308 |
| Cow position: | chr11:80789141-80789436 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 24-306 |
| Cow position: | chr11:67347875-67348156 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 25-306 |
| Cow position: | chr11:26121678-26121963 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 26-187 |
| Cow position: | chr11:41178196-41178030 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-232 |
| Cow position: | chr11:48648998-48648784 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 26-235 |
| Cow position: | chr11:45632712-45632932 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-239 |
| Cow position: | chr11:81388224-81388007 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 26 |
| Conread position: | 26-241 |
| Cow position: | chr11:4024111-4024335 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-245 |
| Cow position: | chr11:44870763-44870534 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 26-253 |
| Cow position: | chr11:21820161-21820392 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 145, 26 |
| Conread position: | 26-255 |
| Cow position: | chr11:4053115-4053340 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 155, 22 |
| Conread position: | 26-255 |
| Cow position: | chr11:16229403-16229649 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 94 |
| Conread position: | 26-255 |
| Cow position: | chr11:85390618-85390856 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-262 |
| Cow position: | chr11:8829544-8829780 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 26-263 |
| Cow position: | chr11:53855770-53855534 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 31 |
| Conread position: | 26-268 |
| Cow position: | chr11:67388442-67388208 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 26-270 |
| Cow position: | chr11:81576443-81576689 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 161, 26 |
| Conread position: | 26-276 |
| Cow position: | chr11:51477870-51477621 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 155, 27 |
| Conread position: | 26-296 |
| Cow position: | chr11:65282254-65281976 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 258 |
| Conread position: | 26-297 |
| Cow position: | chr11:14469745-14469475 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 43, 153 |
| Conread position: | 26-303 |
| Cow position: | chr11:31236159-31236439 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 26-303 |
| Cow position: | chr11:48411772-48411487 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 43, 245 |
| Conread position: | 26-303 |
| Cow position: | chr11:70030663-70030379 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-304 |
| Cow position: | chr11:38832235-38832520 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 43, 256 |
| Conread position: | 26-304 |
| Cow position: | chr11:84774407-84774124 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 26-305 |
| Cow position: | chr11:1667864-1667581 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 26-305 |
| Cow position: | chr11:40402536-40402812 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 149, 46 |
| Conread position: | 26-305 |
| Cow position: | chr11:49935504-49935790 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-305 |
| Cow position: | chr11:75354450-75354166 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-306 |
| Cow position: | chr11:8844421-8844136 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 26-307 |
| Cow position: | chr11:4266911-4267199 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 43, 257 |
| Conread position: | 26-307 |
| Cow position: | chr11:7229604-7229316 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-307 |
| Cow position: | chr11:44106923-44106637 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 61, 26 |
| Conread position: | 26-307 |
| Cow position: | chr11:48658975-48658687 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-307 |
| Cow position: | chr11:49171260-49171542 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 155, 18 |
| Conread position: | 26-308 |
| Cow position: | chr11:1504745-1505041 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 26-308 |
| Cow position: | chr11:5273330-5273619 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 257 |
| Conread position: | 26-308 |
| Cow position: | chr11:5482202-5482491 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 44, 257 |
| Conread position: | 26-308 |
| Cow position: | chr11:7681201-7680916 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 7, 27 |
| Conread position: | 26-308 |
| Cow position: | chr11:8246428-8246145 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:11592226-11591934 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:12112174-12111882 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:12353648-12353937 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 255 |
| Conread position: | 26-308 |
| Cow position: | chr11:14259722-14260006 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 26-308 |
| Cow position: | chr11:19099244-19099530 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 26-308 |
| Cow position: | chr11:23494996-23494707 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:23883591-23883302 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 43, 257 |
| Conread position: | 26-308 |
| Cow position: | chr11:26550720-26550430 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 55, 258 |
| Conread position: | 26-308 |
| Cow position: | chr11:30164806-30164527 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 105, 31 |
| Conread position: | 26-308 |
| Cow position: | chr11:30200454-30200740 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 26-308 |
| Cow position: | chr11:30700738-30700449 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 257 |
| Conread position: | 26-308 |
| Cow position: | chr11:31836428-31836139 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:32077539-32077828 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 43, 256 |
| Conread position: | 26-308 |
| Cow position: | chr11:33001115-33000834 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 26-308 |
| Cow position: | chr11:33601395-33601685 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 259 |
| Conread position: | 26-308 |
| Cow position: | chr11:34297723-34297443 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 160, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:35738100-35738387 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:38235525-38235814 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 53, 187 |
| Conread position: | 26-308 |
| Cow position: | chr11:40772826-40773115 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 26-308 |
| Cow position: | chr11:41093618-41093907 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 43, 256 |
| Conread position: | 26-308 |
| Cow position: | chr11:41167450-41167739 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 48, 257 |
| Conread position: | 26-308 |
| Cow position: | chr11:42358424-42358157 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 26-308 |
| Cow position: | chr11:43917678-43917389 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 258 |
| Conread position: | 26-308 |
| Cow position: | chr11:44579990-44580278 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:47757740-47758033 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:49236731-49237012 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 26-308 |
| Cow position: | chr11:52297917-52298208 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:53280155-53280444 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:56463606-56463317 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 48, 257 |
| Conread position: | 26-308 |
| Cow position: | chr11:58049688-58049972 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 155, 27 |
| Conread position: | 26-308 |
| Cow position: | chr11:59872055-59871770 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:63860400-63860688 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 26-308 |
| Cow position: | chr11:67746656-67746368 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 26-308 |
| Cow position: | chr11:73513125-73513417 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 262 |
| Conread position: | 26-308 |
| Cow position: | chr11:74990865-74990575 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 26-308 |
| Cow position: | chr11:76767657-76767372 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 26-308 |
| Cow position: | chr11:77749295-77749021 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 152 |
| Conread position: | 26-308 |
| Cow position: | chr11:80591601-80591318 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 228 |
| Conread position: | 27-276 |
| Cow position: | chr11:44233652-44233408 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 136, 26 |
| Conread position: | 27-304 |
| Cow position: | chr11:17037285-17037555 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 142 |
| Conread position: | 27-308 |
| Cow position: | chr11:43510732-43511020 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 256 |
| Conread position: | 27-308 |
| Cow position: | chr11:63167277-63167560 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 28-306 |
| Cow position: | chr11:59368794-59369078 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 28-308 |
| Cow position: | chr11:3230562-3230279 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 28-308 |
| Cow position: | chr11:10365161-10365441 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 28-308 |
| Cow position: | chr11:17781801-17782072 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 146, 24 |
| Conread position: | 28-308 |
| Cow position: | chr11:27660480-27660186 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 28-308 |
| Cow position: | chr11:38842862-38842581 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 30-308 |
| Cow position: | chr11:41599453-41599733 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 34-255 |
| Cow position: | chr11:66943975-66944192 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 41-308 |
| Cow position: | chr11:38638099-38638370 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 53-308 |
| Cow position: | chr11:33733372-33733623 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 84, 33 |
| Conread position: | 61-308 |
| Cow position: | chr11:53428816-53429067 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 92 |
| Conread position: | 61-308 |
| Cow position: | chr11:58804617-58804867 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 93, 46 |
| Conread position: | 62-295 |
| Cow position: | chr11:64904290-64904056 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 117, 22 |
| Conread position: | 65-263 |
| Cow position: | chr11:76960650-76960457 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 62 |
| Conread position: | 66-308 |
| Cow position: | chr11:46412837-46412589 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 6, 21 |
| Conread position: | 79-274 |
| Cow position: | chr11:49556141-49556340 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 95, 130 |
| Conread position: | 86-258 |
| Cow position: | chr11:86579107-86578929 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 86-267 |
| Cow position: | chr11:31865818-31865632 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 86-274 |
| Cow position: | chr11:8241926-8242121 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 86-306 |
| Cow position: | chr11:32108948-32108729 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 92, 138 |
| Conread position: | 86-307 |
| Cow position: | chr11:8499248-8499022 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 92, 196 |
| Conread position: | 87-308 |
| Cow position: | chr11:21853070-21853296 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 94, 194 |
| Conread position: | 87-308 |
| Cow position: | chr11:28692792-28693021 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 196 |
| Conread position: | 88-304 |
| Cow position: | chr11:56228109-56227888 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 93, 143 |
| Conread position: | 88-308 |
| Cow position: | chr11:259964-260195 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 88-308 |
| Cow position: | chr11:12763007-12763225 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 93, 58 |
| Conread position: | 88-308 |
| Cow position: | chr11:17980116-17980337 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 27 |
| Conread position: | 90-308 |
| Cow position: | chr11:4206350-4206129 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 90, 129 |
| Conread position: | 90-308 |
| Cow position: | chr11:12316892-12317115 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 90-308 |
| Cow position: | chr11:26067932-26068162 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 73, 198 |
| Conread position: | 90-308 |
| Cow position: | chr11:26482751-26482526 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 167 |
| Conread position: | 90-308 |
| Cow position: | chr11:43361553-43361764 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 95-305 |
| Cow position: | chr11:45155575-45155789 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 185 |
| Conread position: | 96-308 |
| Cow position: | chr11:74928968-74928758 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 124 |
| Conread position: | 99-276 |
| Cow position: | chr11:67599740-67599557 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 82, 158 |
| Conread position: | 105-308 |
| Cow position: | chr11:27922957-27922750 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 76, 8 |
| Conread position: | 113-306 |
| Cow position: | chr11:75511033-75511231 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 68, 170 |
| Conread position: | 113-307 |
| Cow position: | chr11:33687317-33687514 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 171 |
| Conread position: | 113-308 |
| Cow position: | chr11:33687894-33688089 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 170 |
Show alignments to all cow chromosomes.