Cow genome map

Conread name: End1-UMC-pd3end2-002-d02

Conread position: 11-308
Cow position: chr14:14420204-14420506 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 61, 73

Conread position: 17-308
Cow position: chr14:19490181-19489881 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 67, 36

Conread position: 17-308
Cow position: chr14:44293817-44293519 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 8, 37

Conread position: 22-308
Cow position: chr14:23215395-23215103 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 30

Conread position: 22-308
Cow position: chr14:34354730-34354450 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 30

Conread position: 23-227
Cow position: chr14:9108562-9108774 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 120

Conread position: 23-274
Cow position: chr14:43564645-43564390 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 51, 27

Conread position: 25-308
Cow position: chr14:37334797-37335076 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 156, 27

Conread position: 26-221
Cow position: chr14:38143410-38143209 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 130

Conread position: 26-237
Cow position: chr14:9511545-9511764 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 26

Conread position: 26-244
Cow position: chr14:44692338-44692111 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 26-252
Cow position: chr14:46967084-46967314 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 74

Conread position: 26-253
Cow position: chr14:46489531-46489305 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 150, 26

Conread position: 26-255
Cow position: chr14:50122214-50121976 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 26

Conread position: 26-256
Cow position: chr14:18811402-18811170 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 152, 26

Conread position: 26-258
Cow position: chr14:19324157-19324383 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 26

Conread position: 26-261
Cow position: chr14:13360725-13360495 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 229, 35

Conread position: 26-263
Cow position: chr14:47593540-47593299 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 147, 0

Conread position: 26-264
Cow position: chr14:17770989-17771231 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 26

Conread position: 26-273
Cow position: chr14:1661615-1661369 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 24

Conread position: 26-273
Cow position: chr14:34394921-34394666 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 26

Conread position: 26-285
Cow position: chr14:38380012-38380265 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 252, 26

Conread position: 26-290
Cow position: chr14:26496590-26496853 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 155, 26

Conread position: 26-302
Cow position: chr14:13810848-13811130 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 27

Conread position: 26-303
Cow position: chr14:30476155-30476438 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 43, 256

Conread position: 26-304
Cow position: chr14:21534321-21534039 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 56, 26

Conread position: 26-304
Cow position: chr14:48251267-48251544 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 108

Conread position: 26-307
Cow position: chr14:424361-424085 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 154, 26

Conread position: 26-307
Cow position: chr14:12483587-12483302 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 26

Conread position: 26-307
Cow position: chr14:26449344-26449620 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 114, 27

Conread position: 26-307
Cow position: chr14:27040197-27040486 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 258

Conread position: 26-307
Cow position: chr14:37677565-37677281 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 28

Conread position: 26-307
Cow position: chr14:39821892-39822184 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 197

Conread position: 26-307
Cow position: chr14:45278378-45278090 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr14:193338-193049 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 26

Conread position: 26-308
Cow position: chr14:1727333-1727046 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr14:5501112-5500834 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 62, 26

Conread position: 26-308
Cow position: chr14:5532527-5532240 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 89

Conread position: 26-308
Cow position: chr14:5645597-5645306 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 24

Conread position: 26-308
Cow position: chr14:8998793-8998514 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 26

Conread position: 26-308
Cow position: chr14:11150727-11151016 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr14:11474138-11474421 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr14:12066259-12066548 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 24

Conread position: 26-308
Cow position: chr14:12613417-12613128 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr14:12903522-12903234 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr14:13769107-13769395 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 26

Conread position: 26-308
Cow position: chr14:13860347-13860641 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 27

Conread position: 26-308
Cow position: chr14:14786129-14786416 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 55, 26

Conread position: 26-308
Cow position: chr14:15272076-15272365 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 257

Conread position: 26-308
Cow position: chr14:18497174-18496885 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr14:20786571-20786284 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 43, 255

Conread position: 26-308
Cow position: chr14:21728208-21727923 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 19

Conread position: 26-308
Cow position: chr14:22026589-22026874 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 116, 57

Conread position: 26-308
Cow position: chr14:24895860-24895571 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 24

Conread position: 26-308
Cow position: chr14:24922971-24922683 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 27

Conread position: 26-308
Cow position: chr14:24980736-24980447 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 43, 257

Conread position: 26-308
Cow position: chr14:34675287-34674998 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 257

Conread position: 26-308
Cow position: chr14:34906714-34906425 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr14:36109648-36109926 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 187
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 9

Conread position: 26-308
Cow position: chr14:40721063-40720768 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 233

Conread position: 26-308
Cow position: chr14:41081453-41081743 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 258

Conread position: 26-308
Cow position: chr14:44026627-44026915 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 257

Conread position: 26-308
Cow position: chr14:44382467-44382179 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 27

Conread position: 26-308
Cow position: chr14:46303094-46302804 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 257

Conread position: 26-308
Cow position: chr14:47872935-47873224 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 24

Conread position: 26-308
Cow position: chr14:48495419-48495138 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 143, 22

Conread position: 26-308
Cow position: chr14:49995357-49995645 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr14:50069009-50069298 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr14:50141836-50142123 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 12

Conread position: 27-297
Cow position: chr14:2298272-2298002 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 30

Conread position: 27-308
Cow position: chr14:31400314-31400586 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 154, 25

Conread position: 27-308
Cow position: chr14:32450143-32449856 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 42, 17

Conread position: 27-308
Cow position: chr14:42626491-42626776 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 42, 25

Conread position: 27-308
Cow position: chr14:45739138-45739424 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 60, 179

Conread position: 28-255
Cow position: chr14:1802383-1802153 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 24

Conread position: 28-276
Cow position: chr14:8495744-8495993 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 145, 58

Conread position: 28-295
Cow position: chr14:5379344-5379072 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 253

Conread position: 28-307
Cow position: chr14:17488151-17488438 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 22

Conread position: 28-307
Cow position: chr14:38406170-38405883 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 24

Conread position: 28-308
Cow position: chr14:8102494-8102773 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 59, 24

Conread position: 28-308
Cow position: chr14:12834037-12833750 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 255

Conread position: 29-308
Cow position: chr14:28117240-28116961 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 107, 24

Conread position: 31-308
Cow position: chr14:21727137-21726859 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 21

Conread position: 33-308
Cow position: chr14:22689713-22689996 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 19

Conread position: 35-274
Cow position: chr14:37136987-37136741 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 22

Conread position: 37-255
Cow position: chr14:43561370-43561147 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 15

Conread position: 38-289
Cow position: chr14:33714156-33713902 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 31, 14

Conread position: 38-308
Cow position: chr14:34370709-34370434 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 31, 19

Conread position: 38-308
Cow position: chr14:41211893-41212161 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 14

Conread position: 44-257
Cow position: chr14:12243649-12243428 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 8

Conread position: 61-289
Cow position: chr14:12545820-12545587 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 19

Conread position: 62-308
Cow position: chr14:46752433-46752685 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 222

Conread position: 64-297
Cow position: chr14:44253669-44253905 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 72, 40

Conread position: 73-308
Cow position: chr14:41219909-41220148 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 10

Conread position: 80-308
Cow position: chr14:7647246-7647015 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 101, 10

Conread position: 87-308
Cow position: chr14:46303961-46303749 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 49

Conread position: 88-272
Cow position: chr14:25363311-25363501 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 149

Conread position: 88-308
Cow position: chr14:47645550-47645327 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 39

Conread position: 90-308
Cow position: chr14:105793-105574 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 91, 141

Conread position: 96-260
Cow position: chr14:37883114-37882944 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 100-308
Cow position: chr14:9876172-9876382 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 38

Conread position: 107-306
Cow position: chr14:45067066-45066865 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 63

Conread position: 137-308
Cow position: chr14:25683722-25683898 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 146

Show alignments to all cow chromosomes.