Cow genome map

Conread name: End1-UMC-pd3end2-002-d02

Conread position: 17-308
Cow position: chr15:14573120-14573407 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 20-255
Cow position: chr15:47201375-47201620 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 32

Conread position: 20-307
Cow position: chr15:17214800-17215077 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 151, 32

Conread position: 20-308
Cow position: chr15:8629507-8629212 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 76

Conread position: 20-308
Cow position: chr15:30045606-30045301 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 32

Conread position: 23-233
Cow position: chr15:4730825-4730610 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 46, 19

Conread position: 23-245
Cow position: chr15:35739425-35739196 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 58, 29

Conread position: 23-308
Cow position: chr15:2806077-2806350 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 30

Conread position: 23-308
Cow position: chr15:6367294-6367585 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 30

Conread position: 23-308
Cow position: chr15:7841514-7841223 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 5

Conread position: 25-307
Cow position: chr15:36671351-36671080 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 25

Conread position: 25-308
Cow position: chr15:5983823-5983531 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 78, 32

Conread position: 26-227
Cow position: chr15:20458526-20458316 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 26-243
Cow position: chr15:4895204-4895421 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 26

Conread position: 26-245
Cow position: chr15:3720947-3721175 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 24

Conread position: 26-248
Cow position: chr15:40171181-40171411 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 26

Conread position: 26-256
Cow position: chr15:4214353-4214114 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 24

Conread position: 26-258
Cow position: chr15:3257322-3257556 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 26-258
Cow position: chr15:4933578-4933337 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 26

Conread position: 26-258
Cow position: chr15:34140797-34141031 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 155, 27

Conread position: 26-258
Cow position: chr15:35750104-35750344 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 201

Conread position: 26-262
Cow position: chr15:21911104-21911349 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 27

Conread position: 26-269
Cow position: chr15:19214888-19215138 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 32

Conread position: 26-274
Cow position: chr15:5913401-5913644 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 26

Conread position: 26-276
Cow position: chr15:30811814-30811559 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 44, 16

Conread position: 26-303
Cow position: chr15:45292507-45292227 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 61, 26

Conread position: 26-304
Cow position: chr15:6163911-6164196 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 26

Conread position: 26-304
Cow position: chr15:13683523-13683249 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 26

Conread position: 26-304
Cow position: chr15:35405165-35404883 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 36, 260

Conread position: 26-305
Cow position: chr15:18579915-18579629 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 257

Conread position: 26-305
Cow position: chr15:42727567-42727289 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 26

Conread position: 26-306
Cow position: chr15:312607-312895 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 26

Conread position: 26-307
Cow position: chr15:1329341-1329063 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 26

Conread position: 26-307
Cow position: chr15:10243315-10243024 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 144

Conread position: 26-307
Cow position: chr15:12417522-12417807 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 26

Conread position: 26-308
Cow position: chr15:29116-29404 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 24

Conread position: 26-308
Cow position: chr15:60810-60530 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 44, 26

Conread position: 26-308
Cow position: chr15:561919-561630 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 43, 257

Conread position: 26-308
Cow position: chr15:2080523-2080235 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr15:2899063-2899354 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 26, 259

Conread position: 26-308
Cow position: chr15:2928451-2928163 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 27

Conread position: 26-308
Cow position: chr15:4218726-4219010 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 18

Conread position: 26-308
Cow position: chr15:4388940-4388651 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 257

Conread position: 26-308
Cow position: chr15:4629048-4629342 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 27

Conread position: 26-308
Cow position: chr15:4689221-4688936 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 146, 8

Conread position: 26-308
Cow position: chr15:4713100-4712811 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 257

Conread position: 26-308
Cow position: chr15:4787618-4787895 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 145, 26

Conread position: 26-308
Cow position: chr15:5198148-5197859 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr15:5242862-5243143 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr15:5640398-5640687 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 24

Conread position: 26-308
Cow position: chr15:6152451-6152740 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr15:6464257-6463971 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 24

Conread position: 26-308
Cow position: chr15:6488960-6488673 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 26

Conread position: 26-308
Cow position: chr15:6550421-6550710 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 257

Conread position: 26-308
Cow position: chr15:6805906-6805616 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr15:7271532-7271242 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 258

Conread position: 26-308
Cow position: chr15:7941609-7941321 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 26

Conread position: 26-308
Cow position: chr15:9909909-9910197 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 26

Conread position: 26-308
Cow position: chr15:13076717-13076424 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 26

Conread position: 26-308
Cow position: chr15:15343916-15344203 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 178

Conread position: 26-308
Cow position: chr15:19734606-19734895 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 257

Conread position: 26-308
Cow position: chr15:20352617-20352898 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 16

Conread position: 26-308
Cow position: chr15:20413767-20413478 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 257

Conread position: 26-308
Cow position: chr15:22095879-22096163 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 58, 26

Conread position: 26-308
Cow position: chr15:22532961-22533250 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 32

Conread position: 26-308
Cow position: chr15:24043948-24043679 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr15:24568860-24569149 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 257

Conread position: 26-308
Cow position: chr15:26933234-26932947 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 21

Conread position: 26-308
Cow position: chr15:29884129-29884409 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr15:32065100-32065385 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 135, 26

Conread position: 26-308
Cow position: chr15:33527380-33527657 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 61, 26

Conread position: 26-308
Cow position: chr15:37382394-37382685 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr15:37632188-37631908 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 132, 31

Conread position: 26-308
Cow position: chr15:39091013-39091294 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 42, 26

Conread position: 26-308
Cow position: chr15:41360194-41359906 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 26

Conread position: 26-308
Cow position: chr15:42533239-42532954 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 155, 26

Conread position: 26-308
Cow position: chr15:42940103-42939815 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr15:44073638-44073351 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 232

Conread position: 26-308
Cow position: chr15:47842280-47841989 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 26

Conread position: 26-308
Cow position: chr15:48556912-48556623 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 43, 244

Conread position: 27-308
Cow position: chr15:21826058-21825769 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 25

Conread position: 27-308
Cow position: chr15:33228867-33229148 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 55, 26

Conread position: 36-308
Cow position: chr15:33455545-33455273 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 33, 14

Conread position: 44-270
Cow position: chr15:22451874-22451639 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 46-261
Cow position: chr15:31086337-31086550 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 6

Conread position: 52-308
Cow position: chr15:6281808-6281548 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 18

Conread position: 59-308
Cow position: chr15:13388193-13388443 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 20

Conread position: 62-308
Cow position: chr15:36355912-36356165 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 223

Conread position: 72-308
Cow position: chr15:44297723-44297961 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 15

Conread position: 80-308
Cow position: chr15:16741194-16740962 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 191

Conread position: 81-308
Cow position: chr15:29811609-29811840 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 100, 193

Conread position: 88-305
Cow position: chr15:17236755-17236967 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 66, 0

Conread position: 90-262
Cow position: chr15:6945309-6945488 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 90-305
Cow position: chr15:10839093-10838875 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 149

Conread position: 90-307
Cow position: chr15:35866-35648 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 91, 188

Conread position: 92-293
Cow position: chr15:4077008-4077214 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 89, 190

Conread position: 95-308
Cow position: chr15:23774418-23774207 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 85, 124

Conread position: 95-308
Cow position: chr15:51632227-51632022 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 133, 81

Conread position: 96-255
Cow position: chr15:6648295-6648459 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 85, 128

Conread position: 98-308
Cow position: chr15:1776280-1776064 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 183

Conread position: 139-305
Cow position: chr15:21831016-21830845 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 144

Conread position: 148-271
Cow position: chr15:15739028-15738898 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.