Cow genome map

Conread name: End1-UMC-pd3end2-002-d02

Conread position: 3-253
Cow position: chr25:18474540-18474279 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 51

Conread position: 17-308
Cow position: chr25:28264672-28264376 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 31

Conread position: 20-226
Cow position: chr25:18129524-18129315 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 33

Conread position: 23-308
Cow position: chr25:18886164-18886453 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 29

Conread position: 24-276
Cow position: chr25:20613852-20613600 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 28

Conread position: 24-308
Cow position: chr25:11665982-11665702 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 28

Conread position: 25-308
Cow position: chr25:41097880-41098163 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 27

Conread position: 26-226
Cow position: chr25:9957465-9957664 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 148, 26

Conread position: 26-238
Cow position: chr25:34767997-34767787 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 26

Conread position: 26-251
Cow position: chr25:19923838-19923604 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 43, 24

Conread position: 26-259
Cow position: chr25:18265508-18265263 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 50, 26

Conread position: 26-272
Cow position: chr25:25510206-25509951 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 26

Conread position: 26-289
Cow position: chr25:7800333-7800063 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 26

Conread position: 26-305
Cow position: chr25:35754928-35755212 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 103

Conread position: 26-306
Cow position: chr25:20495853-20495586 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 148, 26

Conread position: 26-306
Cow position: chr25:33838690-33838413 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 26

Conread position: 26-308
Cow position: chr25:4522498-4522783 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 27

Conread position: 26-308
Cow position: chr25:9054976-9054697 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr25:11043932-11043647 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr25:12938890-12939179 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 257

Conread position: 26-308
Cow position: chr25:13960376-13960095 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 72, 26

Conread position: 26-308
Cow position: chr25:16922475-16922761 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 57, 27

Conread position: 26-308
Cow position: chr25:17657929-17657648 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 155, 26

Conread position: 26-308
Cow position: chr25:17992831-17993113 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr25:19367382-19367667 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 42, 26

Conread position: 26-308
Cow position: chr25:20075789-20075508 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 159, 26

Conread position: 26-308
Cow position: chr25:22576510-22576780 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 135, 26

Conread position: 26-308
Cow position: chr25:23366984-23366690 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 24

Conread position: 26-308
Cow position: chr25:25480300-25480570 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 155, 26

Conread position: 26-308
Cow position: chr25:25826770-25826476 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 217

Conread position: 26-308
Cow position: chr25:27231667-27231387 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 14

Conread position: 26-308
Cow position: chr25:28275351-28275640 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr25:28863189-28862900 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 44, 257

Conread position: 26-308
Cow position: chr25:34343591-34343879 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 43, 255

Conread position: 26-308
Cow position: chr25:34673270-34673558 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 63

Conread position: 26-308
Cow position: chr25:35567573-35567856 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 55

Conread position: 26-308
Cow position: chr25:37593719-37593433 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr25:39386515-39386801 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 65

Conread position: 26-308
Cow position: chr25:40321973-40322262 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 26

Conread position: 26-308
Cow position: chr25:41121318-41121032 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 65

Conread position: 26-308
Cow position: chr25:41135434-41135717 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 26

Conread position: 27-308
Cow position: chr25:2595082-2594799 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 54, 25

Conread position: 27-308
Cow position: chr25:26282340-26282053 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 218

Conread position: 28-308
Cow position: chr25:8655606-8655320 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 41, 25

Conread position: 28-308
Cow position: chr25:18072534-18072252 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 22

Conread position: 28-308
Cow position: chr25:22151420-22151133 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 41, 254

Conread position: 32-305
Cow position: chr25:393571-393291 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 20

Conread position: 39-296
Cow position: chr25:24654870-24655134 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 30, 245

Conread position: 90-270
Cow position: chr25:24636892-24637076 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 145

Conread position: 90-308
Cow position: chr25:34502971-34503194 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 191

Conread position: 96-308
Cow position: chr25:33574493-33574705 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 76, 156

Conread position: 99-308
Cow position: chr25:37648659-37648458 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 55

Conread position: 113-308
Cow position: chr25:20633988-20633789 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 115

Conread position: 180-308
Cow position: chr25:28420549-28420677 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 79

Show alignments to all cow chromosomes.