Cow genome map
Conread name: | End1-UMC-pd3end2-002-d02 |
Conread position: | 3-253 |
Cow position: | chr25:18474540-18474279 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 188 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 8, 51 |
Conread position: | 17-308 |
Cow position: | chr25:28264672-28264376 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 196 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 53, 31 |
Conread position: | 20-226 |
Cow position: | chr25:18129524-18129315 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 146 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 13, 33 |
Conread position: | 23-308 |
Cow position: | chr25:18886164-18886453 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 207 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 46, 29 |
Conread position: | 24-276 |
Cow position: | chr25:20613852-20613600 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 188 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 47, 28 |
Conread position: | 24-308 |
Cow position: | chr25:11665982-11665702 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 199 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 45, 28 |
Conread position: | 25-308 |
Cow position: | chr25:41097880-41098163 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 195 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 45, 27 |
Conread position: | 26-226 |
Cow position: | chr25:9957465-9957664 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 154 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 148, 26 |
Conread position: | 26-238 |
Cow position: | chr25:34767997-34767787 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 152 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 48, 26 |
Conread position: | 26-251 |
Cow position: | chr25:19923838-19923604 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 165 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 43, 24 |
Conread position: | 26-259 |
Cow position: | chr25:18265508-18265263 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 177 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 50, 26 |
Conread position: | 26-272 |
Cow position: | chr25:25510206-25509951 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 181 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 26-289 |
Cow position: | chr25:7800333-7800063 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 200 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 48, 26 |
Conread position: | 26-305 |
Cow position: | chr25:35754928-35755212 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 194 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 43, 103 |
Conread position: | 26-306 |
Cow position: | chr25:20495853-20495586 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 195 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 148, 26 |
Conread position: | 26-306 |
Cow position: | chr25:33838690-33838413 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 191 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 61, 26 |
Conread position: | 26-308 |
Cow position: | chr25:4522498-4522783 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 27 |
Conread position: | 26-308 |
Cow position: | chr25:9054976-9054697 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 209 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 26-308 |
Cow position: | chr25:11043932-11043647 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 197 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 26-308 |
Cow position: | chr25:12938890-12939179 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 197 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 43, 257 |
Conread position: | 26-308 |
Cow position: | chr25:13960376-13960095 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 191 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 72, 26 |
Conread position: | 26-308 |
Cow position: | chr25:16922475-16922761 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 209 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 57, 27 |
Conread position: | 26-308 |
Cow position: | chr25:17657929-17657648 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 198 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 155, 26 |
Conread position: | 26-308 |
Cow position: | chr25:17992831-17993113 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 202 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 26-308 |
Cow position: | chr25:19367382-19367667 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 210 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 42, 26 |
Conread position: | 26-308 |
Cow position: | chr25:20075789-20075508 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 209 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 159, 26 |
Conread position: | 26-308 |
Cow position: | chr25:22576510-22576780 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 194 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 135, 26 |
Conread position: | 26-308 |
Cow position: | chr25:23366984-23366690 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 213 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 43, 24 |
Conread position: | 26-308 |
Cow position: | chr25:25480300-25480570 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 199 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 155, 26 |
Conread position: | 26-308 |
Cow position: | chr25:25826770-25826476 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 205 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 42, 217 |
Conread position: | 26-308 |
Cow position: | chr25:27231667-27231387 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 200 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 21, 14 |
Conread position: | 26-308 |
Cow position: | chr25:28275351-28275640 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 205 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 26-308 |
Cow position: | chr25:28863189-28862900 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 200 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 44, 257 |
Conread position: | 26-308 |
Cow position: | chr25:34343591-34343879 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 199 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 43, 255 |
Conread position: | 26-308 |
Cow position: | chr25:34673270-34673558 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 195 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 26, 63 |
Conread position: | 26-308 |
Cow position: | chr25:35567573-35567856 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 196 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 43, 55 |
Conread position: | 26-308 |
Cow position: | chr25:37593719-37593433 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 198 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 26-308 |
Cow position: | chr25:39386515-39386801 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 192 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 43, 65 |
Conread position: | 26-308 |
Cow position: | chr25:40321973-40322262 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 207 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 26-308 |
Cow position: | chr25:41121318-41121032 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 198 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 43, 65 |
Conread position: | 26-308 |
Cow position: | chr25:41135434-41135717 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 196 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 27-308 |
Cow position: | chr25:2595082-2594799 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 214 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 54, 25 |
Conread position: | 27-308 |
Cow position: | chr25:26282340-26282053 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 200 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 42, 218 |
Conread position: | 28-308 |
Cow position: | chr25:8655606-8655320 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 195 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 41, 25 |
Conread position: | 28-308 |
Cow position: | chr25:18072534-18072252 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 198 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 72, 22 |
Conread position: | 28-308 |
Cow position: | chr25:22151420-22151133 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 195 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 41, 254 |
Conread position: | 32-305 |
Cow position: | chr25:393571-393291 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 185 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 37, 20 |
Conread position: | 39-296 |
Cow position: | chr25:24654870-24655134 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 181 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 30, 245 |
Conread position: | 90-270 |
Cow position: | chr25:24636892-24637076 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 135 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 90, 145 |
Conread position: | 90-308 |
Cow position: | chr25:34502971-34503194 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 158 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 91, 191 |
Conread position: | 96-308 |
Cow position: | chr25:33574493-33574705 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 160 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 76, 156 |
Conread position: | 99-308 |
Cow position: | chr25:37648659-37648458 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 157 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 82, 55 |
Conread position: | 113-308 |
Cow position: | chr25:20633988-20633789 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 143 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 68, 115 |
Conread position: | 180-308 |
Cow position: | chr25:28420549-28420677 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 100 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 100, 79 |
Show alignments to all cow chromosomes.