Cow genome map
| Conread name: | End1-UMC-pd3end2-002-d02 |
| Conread position: | 17-258 |
| Cow position: | chr26:6097986-6098232 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 79, 35 |
| Conread position: | 20-308 |
| Cow position: | chr26:20497106-20496820 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 6 |
| Conread position: | 23-238 |
| Cow position: | chr26:8653556-8653772 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 151, 29 |
| Conread position: | 23-255 |
| Cow position: | chr26:8352300-8352076 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 150, 29 |
| Conread position: | 24-218 |
| Cow position: | chr26:755800-756002 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 24-308 |
| Cow position: | chr26:14487688-14487973 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 28, 52 |
| Conread position: | 25-308 |
| Cow position: | chr26:27987027-27987305 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 26-200 |
| Cow position: | chr26:9867771-9867954 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-217 |
| Cow position: | chr26:23600462-23600656 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 155, 26 |
| Conread position: | 26-229 |
| Cow position: | chr26:7506908-7506706 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 137, 26 |
| Conread position: | 26-239 |
| Cow position: | chr26:14897661-14897439 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 26-256 |
| Cow position: | chr26:16720048-16719808 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-261 |
| Cow position: | chr26:34015411-34015166 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 26-263 |
| Cow position: | chr26:12965295-12965527 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 26-268 |
| Cow position: | chr26:11266274-11266028 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 155, 23 |
| Conread position: | 26-303 |
| Cow position: | chr26:22831466-22831749 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 43, 112 |
| Conread position: | 26-307 |
| Cow position: | chr26:9836045-9835756 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 26-308 |
| Cow position: | chr26:5680114-5679814 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-308 |
| Cow position: | chr26:6430139-6429869 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 157, 26 |
| Conread position: | 26-308 |
| Cow position: | chr26:6843649-6843936 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 26-308 |
| Cow position: | chr26:10698941-10699214 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 26-308 |
| Cow position: | chr26:11269786-11269506 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 6, 27 |
| Conread position: | 26-308 |
| Cow position: | chr26:14173634-14173347 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 26-308 |
| Cow position: | chr26:17393327-17393611 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 229 |
| Conread position: | 26-308 |
| Cow position: | chr26:20256191-20255908 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 26-308 |
| Cow position: | chr26:25393360-25393070 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 26-308 |
| Cow position: | chr26:35424070-35423783 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 43, 230 |
| Conread position: | 27-307 |
| Cow position: | chr26:17327740-17327447 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 260 |
| Conread position: | 28-233 |
| Cow position: | chr26:15559057-15558844 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 28-253 |
| Cow position: | chr26:20299442-20299656 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 6, 25 |
| Conread position: | 28-308 |
| Cow position: | chr26:21859153-21858879 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 35-228 |
| Cow position: | chr26:18933781-18933980 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 78-241 |
| Cow position: | chr26:12652393-12652562 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 79-273 |
| Cow position: | chr26:614678-614874 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 107, 144 |
| Conread position: | 90-278 |
| Cow position: | chr26:5767401-5767212 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 45 |
| Conread position: | 90-289 |
| Cow position: | chr26:2740099-2740307 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 37, 197 |
| Conread position: | 90-308 |
| Cow position: | chr26:2670313-2670533 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 162 |
| Conread position: | 90-308 |
| Cow position: | chr26:30725410-30725634 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 192 |
| Conread position: | 91-307 |
| Cow position: | chr26:1885516-1885298 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 132 |
| Conread position: | 104-258 |
| Cow position: | chr26:21350994-21350833 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.