Cow genome map


           Conread name:
           End1-UMC-pd3end3-007-g08
        

               Conread position:
               200-311
               

               Cow position:
               chr22:25311434-25311546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               203-306
               

               Cow position:
               chr22:30270832-30270728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               203-309
               

               Cow position:
               chr22:10683554-10683660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               203-314
               

               Cow position:
               chr22:42933368-42933479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-314
               

               Cow position:
               chr22:19592541-19592427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               206-302
               

               Cow position:
               chr22:31704910-31705007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               206-309
               

               Cow position:
               chr22:2476091-2476195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               207-314
               

               Cow position:
               chr22:39601521-39601414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               208-314
               

               Cow position:
               chr22:10132122-10132014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               211-314
               

               Cow position:
               chr22:4161504-4161608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.