Cow genome map


           Conread name:
           End1-UMC-pd3end3-007-g08
        

               Conread position:
               172-314
               

               Cow position:
               chr9:16983062-16982921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               60, 131
               

               Conread position:
               200-314
               

               Cow position:
               chr9:8914181-8914295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               202-314
               

               Cow position:
               chr9:44217675-44217787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               203-314
               

               Cow position:
               chr9:11146734-11146622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               206-314
               

               Cow position:
               chr9:21956629-21956738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               208-314
               

               Cow position:
               chr9:31886476-31886371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 74
               

               Conread position:
               209-314
               

               Cow position:
               chr9:46242350-46242245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 95
               
Show alignments to all cow chromosomes.