Cow genome map


           Conread name:
           End1-UMC-pd3end3-007-g08
        

               Conread position:
               168-314
               

               Cow position:
               chrX:41071123-41070974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               203-314
               

               Cow position:
               chrX:42458744-42458634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               204-312
               

               Cow position:
               chrX:10106820-10106928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-314
               

               Cow position:
               chrX:33590867-33590757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               206-314
               

               Cow position:
               chrX:6480129-6480020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               208-314
               

               Cow position:
               chrX:30088474-30088579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               209-314
               

               Cow position:
               chrX:25193806-25193700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.