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Cow genome map

           
Conread name:
           
End3-UMC-pd6end1-003-c12
        

               
Conread position:
               
1-250
               

               
Cow position:
               
chr1:7196971-7196704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr1:16820237-16819883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 153
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr1:19828364-19828708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 183
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr1:21257976-21258330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 310
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr1:56666731-56666371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
29, 316
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr1:63046512-63046156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
29, 312
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr1:65390188-65389828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 316
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:3263617-3263259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 313
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:14240436-14240797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
30, 316
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:25052958-25053317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
30, 314
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:30372521-30372175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 245
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:30531403-30531750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
64, 305
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:52355043-52355402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 314
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:52371603-52371242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:59483236-59483593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
30, 312
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:61342081-61342436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
28, 310
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:63044530-63044887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 270
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:66971541-66971889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:71559119-71559474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
29, 307
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:72087217-72086869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:73063711-73064065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 312
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:79453132-79453490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 313
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:86599380-86599745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
30, 320
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:89432034-89431673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
30, 316
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:94663284-94662923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 316
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr1:99917070-99916709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr1:48345799-48345439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 314
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr1:80901854-80902093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr1:102552614-102552343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr1:96390660-96390838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr1:59019142-59018931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr1:48731448-48731657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr1:88338068-88337827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr1:40292522-40292780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 126
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr1:10335142-10334882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr1:22227233-22226943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 159
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr1:22481037-22481384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr1:53397304-53396976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr1:24581020-24580677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr1:42875031-42875385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 222
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr1:42887874-42888211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 252
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr1:99117639-99117286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 204
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr1:11854327-11854674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
30, 241
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr1:21376934-21377288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr1:53520279-53519934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr1:57573967-57574316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 282
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr1:99571965-99572296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 29
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr1:100421213-100420868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr1:101834012-101833667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 196
               

               
Conread position:
               
4-163
               

               
Cow position:
               
chr1:8514892-8514725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr1:92433391-92433173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
58, 155
               

               
Conread position:
               
6-275
               

               
Cow position:
               
chr1:22288606-22288326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
7-330
               

               
Cow position:
               
chr1:13438720-13438391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
171, 48
               

               
Conread position:
               
10-269
               

               
Cow position:
               
chr1:20098708-20098432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
11-173
               

               
Cow position:
               
chr1:19517829-19517998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
11-216
               

               
Cow position:
               
chr1:27494844-27494634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
11-329
               

               
Cow position:
               
chr1:76860420-76860751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
18-315
               

               
Cow position:
               
chr1:30495156-30494849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
19-210
               

               
Cow position:
               
chr1:21132258-21132452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
19-215
               

               
Cow position:
               
chr1:34685094-34684900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
19-258
               

               
Cow position:
               
chr1:86505755-86506011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
23-327
               

               
Cow position:
               
chr1:13718245-13718564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
23-329
               

               
Cow position:
               
chr1:85142621-85142953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
23-330
               

               
Cow position:
               
chr1:91889813-91890121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
27-283
               

               
Cow position:
               
chr1:24921920-24922191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 242
               

               
Conread position:
               
29-332
               

               
Cow position:
               
chr1:90622642-90622956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
30-141
               

               
Cow position:
               
chr1:61728405-61728519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
30-314
               

               
Cow position:
               
chr1:33392607-33392304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
30-330
               

               
Cow position:
               
chr1:34858107-34858407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
31-163
               

               
Cow position:
               
chr1:60033332-60033464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
31-278
               

               
Cow position:
               
chr1:68854537-68854277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
31-294
               

               
Cow position:
               
chr1:99105845-99106111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr1:29915754-29915476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
31-318
               

               
Cow position:
               
chr1:18024232-18024536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 292
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr1:5162757-5163071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr1:76617887-76618204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
16, 234
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr1:82567996-82567686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr1:89089949-89090267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 273
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr1:98618251-98617942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
32-192
               

               
Cow position:
               
chr1:43650318-43650489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
32-193
               

               
Cow position:
               
chr1:10067879-10068047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
32-195
               

               
Cow position:
               
chr1:23370977-23371146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
32-198
               

               
Cow position:
               
chr1:39702087-39701914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
32-200
               

               
Cow position:
               
chr1:22525199-22525025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
32-200
               

               
Cow position:
               
chr1:86574413-86574236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
32-205
               

               
Cow position:
               
chr1:44229802-44229619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
32-210
               

               
Cow position:
               
chr1:88297796-88297619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
32-211
               

               
Cow position:
               
chr1:28413250-28413431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
32-220
               

               
Cow position:
               
chr1:31238597-31238800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-220
               

               
Cow position:
               
chr1:77619872-77619675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
32-221
               

               
Cow position:
               
chr1:32360817-32361006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
32-222
               

               
Cow position:
               
chr1:102290266-102290466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:12465441-12465630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:15743404-15743204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:24571551-24571758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 158
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:38479198-38478995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:44836930-44837134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:55203321-55203526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:70864830-70864630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:71124052-71124255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:72808166-72807963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:74302530-74302728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:88028399-88028206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr1:97075914-97076117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
32-238
               

               
Cow position:
               
chr1:77461717-77461501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-239
               

               
Cow position:
               
chr1:69289512-69289295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr1:21079853-21080089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-252
               

               
Cow position:
               
chr1:8845243-8845004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-253
               

               
Cow position:
               
chr1:70068824-70069064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-254
               

               
Cow position:
               
chr1:58195505-58195731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
32-256
               

               
Cow position:
               
chr1:81320740-81320983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 125
               

               
Conread position:
               
32-258
               

               
Cow position:
               
chr1:71081261-71081502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
32-259
               

               
Cow position:
               
chr1:15049389-15049161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
32-259
               

               
Cow position:
               
chr1:57946519-57946271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
32-259
               

               
Cow position:
               
chr1:73017884-73018128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:3932053-3932300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:9595360-9595606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:10365153-10364906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:20848944-20849191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:32795788-32795541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:34392273-34392521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:52381031-52380784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:52508036-52508280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
15, 231
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:66368806-66369053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:82163210-82163459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:82920554-82920799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr1:101973824-101974068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
32-264
               

               
Cow position:
               
chr1:68252916-68252665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
32-264
               

               
Cow position:
               
chr1:71666887-71667146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
32-266
               

               
Cow position:
               
chr1:39249852-39250095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 204
               

               
Conread position:
               
32-268
               

               
Cow position:
               
chr1:66242478-66242719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 166
               

               
Conread position:
               
32-269
               

               
Cow position:
               
chr1:35785366-35785119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 209
               

               
Conread position:
               
32-269
               

               
Cow position:
               
chr1:58218678-58218428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
32-273
               

               
Cow position:
               
chr1:73463552-73463291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr1:6765515-6765771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr1:70380826-70381086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr1:86705724-86705464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr1:99837764-99838025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-275
               

               
Cow position:
               
chr1:12057665-12057925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
32-278
               

               
Cow position:
               
chr1:60280116-60279858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 161
               

               
Conread position:
               
32-279
               

               
Cow position:
               
chr1:40061795-40061544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
32-281
               

               
Cow position:
               
chr1:3440549-3440282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 182
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr1:57636199-57635930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
32-297
               

               
Cow position:
               
chr1:10005408-10005685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
32-297
               

               
Cow position:
               
chr1:94464695-94464416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
32-297
               

               
Cow position:
               
chr1:98789436-98789157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
32-309
               

               
Cow position:
               
chr1:4452500-4452796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
53, 116
               

               
Conread position:
               
32-309
               

               
Cow position:
               
chr1:61283006-61282713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
32-310
               

               
Cow position:
               
chr1:42554584-42554295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
32-317
               

               
Cow position:
               
chr1:23117621-23117923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 263
               

               
Conread position:
               
32-318
               

               
Cow position:
               
chr1:55327658-55327955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
32-319
               

               
Cow position:
               
chr1:89766945-89767247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 262
               

               
Conread position:
               
32-320
               

               
Cow position:
               
chr1:72803932-72804233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 265
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr1:9262083-9261776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr1:38545133-38545438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr1:67913667-67913362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
32-324
               

               
Cow position:
               
chr1:55273457-55273766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-324
               

               
Cow position:
               
chr1:74513556-74513867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-324
               

               
Cow position:
               
chr1:83060055-83060365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 271
               

               
Conread position:
               
32-326
               

               
Cow position:
               
chr1:44078836-44079144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
32-326
               

               
Cow position:
               
chr1:78291144-78290832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 271
               

               
Conread position:
               
32-327
               

               
Cow position:
               
chr1:19145574-19145896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-327
               

               
Cow position:
               
chr1:72306771-72307048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
32-328
               

               
Cow position:
               
chr1:3340259-3339938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 262
               

               
Conread position:
               
32-328
               

               
Cow position:
               
chr1:84449212-84448897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:2990070-2989754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:7162221-7162537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:7406258-7405942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:7712361-7712051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 148
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:8517483-8517799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:11665954-11666270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:12374717-12375033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:13579193-13579506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:16838904-16838588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 104
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:17187653-17187969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:17248076-17248392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:17938166-17938483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
15, 275
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:18699017-18698701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:19235910-19236226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:20001421-20001723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:20527746-20527431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 271
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:20543809-20543498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:20846426-20846742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:21534674-21534991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 273
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:23861122-23861438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:24440474-24440790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 171
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:26446734-26446425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:26536599-26536915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:26588537-26588221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:26722077-26722391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 270
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:27309506-27309807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:29461913-29461601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:31351182-31351495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 271
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:31498683-31498391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:42057168-42056870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:47078594-47078909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:48810607-48810923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:49268467-49268155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
15, 268
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:53309076-53309388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:53650233-53649923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:54471827-54472143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:56205227-56205539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:56631957-56631651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:57506378-57506062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:60250839-60251155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:61097087-61096771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:61331376-61331692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:61747866-61748179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 179
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:62928056-62927740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:63340885-63341201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:66145287-66144971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:68145384-68145700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:69503787-69504103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:71045091-71044778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:71135476-71135172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:71795120-71794804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:72139778-72139463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:72589777-72590093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:73564891-73565207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:73968099-73967783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:75403481-75403165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:77748330-77748014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:77925068-77924752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:79554082-79553767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 265
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:80564490-80564806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:82880014-82879705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:86496876-86496560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:89234446-89234761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 271
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:89484678-89484370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:91673818-91673503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:93850888-93850572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:98353808-98354124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:99674749-99675065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:102784114-102783808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 143
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr1:102815060-102814744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:3382732-3383049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:3930753-3931070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 263
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:3969699-3969994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:4277235-4276927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:4375216-4375514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:5505525-5505209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:6196693-6197008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:7837170-7837491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:8602389-8602706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:8828607-8828291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:13250958-13251275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:16116813-16117129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:16973536-16973842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:17009145-17009462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:17033008-17033323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:18196182-18195865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:18962162-18962461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 199
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:19440957-19441270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 268
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:20798408-20798090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:20832469-20832152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:21113837-21114153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:22012376-22012691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:22789984-22789671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:24655415-24655100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:26838534-26838225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:28811655-28811972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:28876684-28876367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
12, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:29038127-29037810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 274
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:29429191-29428869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 277
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:30079527-30079211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:31352046-31352356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 158
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:31391714-31392026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:32562952-32563265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:33547816-33548131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:33716547-33716230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:33854853-33854537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 271
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:36645869-36646181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:39234920-39235233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 268
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:40681144-40681461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 263
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:42740283-42739966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:46694324-46694637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 250
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:47454394-47454707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:52754947-52755262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:53578642-53578326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:54933514-54933198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 279
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:55043677-55043992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:55158795-55159113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
16, 273
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:55780455-55780141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 176
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:56190832-56191148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 248
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:56425499-56425183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 288
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:57362746-57363063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:57571419-57571101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:57678796-57679109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 229
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:58192219-58192535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 263
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:58340501-58340192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 242
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:61203971-61203654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:63240278-63239964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 300
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:66491164-66490851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 268
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:67006461-67006148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:67078240-67078556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 270
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:68602043-68602360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
8, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:68812346-68812648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:69406745-69406428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:69770405-69770089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 271
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:70051807-70051509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:71691140-71690826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:71792516-71792200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:73761959-73762275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:74939310-74939007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:76748810-76749118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
15, 279
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:76878618-76878302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 271
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:77103777-77104080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 165
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:77554416-77554728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 282
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:78921426-78921743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:79334400-79334717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:81308948-81308631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:82091482-82091165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
12, 273
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:82479570-82479253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:82909246-82909561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 287
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:83136522-83136212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:85776875-85777189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 118
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:88179447-88179128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 274
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:88327898-88328210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 260
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:89112402-89112093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:89185881-89186188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:89492651-89492960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 264
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:90393170-90393485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 301
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:90913416-90913099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:91105625-91105312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 268
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:93858109-93857792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:100591186-100591502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 263
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:100887921-100888238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr1:102431156-102431469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 268
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr1:19884314-19884633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
32-332
               

               
Cow position:
               
chr1:28176335-28176023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 254
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr1:85338436-85338136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 22
               

               
Conread position:
               
32-338
               

               
Cow position:
               
chr1:44127266-44127579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
32-339
               

               
Cow position:
               
chr1:100451092-100451408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
32-342
               

               
Cow position:
               
chr1:67290202-67289877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
32-369
               

               
Cow position:
               
chr1:73443286-73443624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
32-479
               

               
Cow position:
               
chr1:48828125-48827666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
33-205
               

               
Cow position:
               
chr1:85163733-85163913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
33-206
               

               
Cow position:
               
chr1:81356710-81356891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
33-259
               

               
Cow position:
               
chr1:4207913-4208158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
33-282
               

               
Cow position:
               
chr1:68783327-68783586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
33-315
               

               
Cow position:
               
chr1:24595170-24594891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
33-328
               

               
Cow position:
               
chr1:85773791-85773480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 295
               

               
Conread position:
               
33-329
               

               
Cow position:
               
chr1:37323699-37324000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
33-329
               

               
Cow position:
               
chr1:52054406-52054091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
33-329
               

               
Cow position:
               
chr1:58419254-58418945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr1:6165561-6165252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr1:10034113-10033808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 194
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr1:35598225-35598540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
14, 271
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr1:52434608-52434295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr1:53371954-53371626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr1:63049163-63048849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
51, 237
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr1:72987041-72986728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr1:95474324-95474632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
34-260
               

               
Cow position:
               
chr1:84894148-84893902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
34-329
               

               
Cow position:
               
chr1:26811490-26811803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
34-329
               

               
Cow position:
               
chr1:68846140-68846439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
34-329
               

               
Cow position:
               
chr1:83170027-83169713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 270
               

               
Conread position:
               
34-330
               

               
Cow position:
               
chr1:25553388-25553074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 271
               

               
Conread position:
               
35-255
               

               
Cow position:
               
chr1:92881266-92881494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 209
               

               
Conread position:
               
35-261
               

               
Cow position:
               
chr1:60308463-60308232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr1:51967823-51967522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
35-329
               

               
Cow position:
               
chr1:92196555-92196248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
35-329
               

               
Cow position:
               
chr1:92279243-92279535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 17
               

               
Conread position:
               
35-330
               

               
Cow position:
               
chr1:21678374-21678070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
9, 202
               

               
Conread position:
               
35-330
               

               
Cow position:
               
chr1:38712294-38711982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
35-330
               

               
Cow position:
               
chr1:88563341-88563644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
36-324
               

               
Cow position:
               
chr1:101787371-101787662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
139, 63
               

               
Conread position:
               
36-330
               

               
Cow position:
               
chr1:5013216-5013528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
37-210
               

               
Cow position:
               
chr1:16337514-16337689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 6
               

               
Conread position:
               
38-228
               

               
Cow position:
               
chr1:81362856-81362661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
38-236
               

               
Cow position:
               
chr1:53494782-53494583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
38-260
               

               
Cow position:
               
chr1:46930375-46930614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
49, 5
               

               
Conread position:
               
38-270
               

               
Cow position:
               
chr1:50273292-50273520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
38-274
               

               
Cow position:
               
chr1:72114715-72114467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
56, 5
               

               
Conread position:
               
38-278
               

               
Cow position:
               
chr1:19793278-19793024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
38-290
               

               
Cow position:
               
chr1:98656389-98656657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
38-297
               

               
Cow position:
               
chr1:98559492-98559218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
38-327
               

               
Cow position:
               
chr1:24780902-24781207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
38-329
               

               
Cow position:
               
chr1:99628504-99628787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr1:12468219-12468520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 5
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr1:28677624-28677328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 5
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr1:51980550-51980255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 5
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr1:56746463-56746154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr1:58528849-58528542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr1:61746602-61746898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr1:79632977-79633282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 5
               

               
Conread position:
               
43-185
               

               
Cow position:
               
chr1:11728312-11728167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
43-318
               

               
Cow position:
               
chr1:70387754-70388045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
43-327
               

               
Cow position:
               
chr1:58439725-58440025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
43-329
               

               
Cow position:
               
chr1:68950974-68950678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
43-330
               

               
Cow position:
               
chr1:92920662-92920966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
44-259
               

               
Cow position:
               
chr1:31515549-31515773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
50-329
               

               
Cow position:
               
chr1:50764705-50764427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
50-330
               

               
Cow position:
               
chr1:6240717-6241003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
50-330
               

               
Cow position:
               
chr1:46839343-46839059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
51-329
               

               
Cow position:
               
chr1:61339753-61340049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 252
               

               
Conread position:
               
52-329
               

               
Cow position:
               
chr1:89793519-89793224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 251
               

               
Conread position:
               
54-278
               

               
Cow position:
               
chr1:38401172-38400944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
54-327
               

               
Cow position:
               
chr1:19483683-19483970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
54-329
               

               
Cow position:
               
chr1:18087993-18087700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 249
               

               
Conread position:
               
55-312
               

               
Cow position:
               
chr1:42054017-42054277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 176
               

               
Conread position:
               
55-330
               

               
Cow position:
               
chr1:52379856-52379563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
55-330
               

               
Cow position:
               
chr1:70534906-70535193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
56-329
               

               
Cow position:
               
chr1:55145599-55145316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
56-330
               

               
Cow position:
               
chr1:68282106-68281819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
58-330
               

               
Cow position:
               
chr1:21091020-21090735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 240
               

               
Conread position:
               
58-330
               

               
Cow position:
               
chr1:43448951-43449242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
61-211
               

               
Cow position:
               
chr1:51393731-51393579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 118
               

               
Conread position:
               
61-329
               

               
Cow position:
               
chr1:100536700-100536419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
63-214
               

               
Cow position:
               
chr1:79002571-79002731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
63-330
               

               
Cow position:
               
chr1:31341854-31342129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
25, 194
               

               
Conread position:
               
64-317
               

               
Cow position:
               
chr1:57671255-57671527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
64-329
               

               
Cow position:
               
chr1:40532336-40532602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
160, 21
               

               
Conread position:
               
64-329
               

               
Cow position:
               
chr1:57970059-57970322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
64-330
               

               
Cow position:
               
chr1:38279184-38279470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
65-333
               

               
Cow position:
               
chr1:11019000-11018722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
67-330
               

               
Cow position:
               
chr1:11288836-11289119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 238
               

               
Conread position:
               
68-289
               

               
Cow position:
               
chr1:31814557-31814328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
70-259
               

               
Cow position:
               
chr1:78796527-78796720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
70-329
               

               
Cow position:
               
chr1:28521199-28520922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
17, 233
               

               
Conread position:
               
70-329
               

               
Cow position:
               
chr1:73440514-73440237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 233
               

               
Conread position:
               
70-329
               

               
Cow position:
               
chr1:99119032-99118755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 233
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr1:11199083-11199360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
13, 232
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr1:30035161-30034895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
72-216
               

               
Cow position:
               
chr1:90605315-90605460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 122
               

               
Conread position:
               
72-261
               

               
Cow position:
               
chr1:30033812-30033611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
72-264
               

               
Cow position:
               
chr1:53424460-53424264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
146, 51
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr1:54477325-54477069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 55
               

               
Conread position:
               
72-327
               

               
Cow position:
               
chr1:22727842-22727565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
72-329
               

               
Cow position:
               
chr1:51444783-51444514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr1:99581914-99582187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
75-274
               

               
Cow position:
               
chr1:24202612-24202821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
75-330
               

               
Cow position:
               
chr1:52510580-52510844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
77-259
               

               
Cow position:
               
chr1:7746468-7746274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
77-329
               

               
Cow position:
               
chr1:7324606-7324342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
81-221
               

               
Cow position:
               
chr1:95018535-95018680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
81-330
               

               
Cow position:
               
chr1:33987292-33987555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
81-330
               

               
Cow position:
               
chr1:40509726-40509990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
82-330
               

               
Cow position:
               
chr1:82369948-82369690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
83-329
               

               
Cow position:
               
chr1:61662006-61662266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
84-329
               

               
Cow position:
               
chr1:72864474-72864221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 175
               

               
Conread position:
               
84-329
               

               
Cow position:
               
chr1:85630867-85630607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 216
               

               
Conread position:
               
85-272
               

               
Cow position:
               
chr1:51487990-51488185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
85-289
               

               
Cow position:
               
chr1:71939199-71939415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 205
               

               
Conread position:
               
85-329
               

               
Cow position:
               
chr1:58196926-58197167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
91, 143
               

               
Conread position:
               
85-330
               

               
Cow position:
               
chr1:2764652-2764386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
85-330
               

               
Cow position:
               
chr1:61727558-61727809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
19, 198
               

               
Conread position:
               
85-386
               

               
Cow position:
               
chr1:45021754-45021445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
93, 243
               

               
Conread position:
               
86-173
               

               
Cow position:
               
chr1:79843700-79843613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
86-329
               

               
Cow position:
               
chr1:7739233-7738985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
89-225
               

               
Cow position:
               
chr1:90391356-90391496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
89-329
               

               
Cow position:
               
chr1:68818387-68818638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
96-327
               

               
Cow position:
               
chr1:93111833-93112074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
99-329
               

               
Cow position:
               
chr1:73010498-73010255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
79, 199
               

               
Conread position:
               
104-369
               

               
Cow position:
               
chr1:22529302-22529582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 272
               

               
Conread position:
               
107-330
               

               
Cow position:
               
chr1:79590357-79590121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
109-329
               

               
Cow position:
               
chr1:21165273-21165040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 189
               

               
Conread position:
               
112-293
               

               
Cow position:
               
chr1:51982949-51982750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
146-426
               

               
Cow position:
               
chr1:61722120-61722412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
175-329
               

               
Cow position:
               
chr1:54295714-54295871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
183-329
               

               
Cow position:
               
chr1:81357230-81357385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
352-553
               

               
Cow position:
               
chr1:79255188-79254986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
363-555
               

               
Cow position:
               
chr1:23969658-23969857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
39, 48
               
Show alignments to all cow chromosomes.