Cow genome map
| Conread name: | End3-UMC-pd6end1-003-c12 |
| Conread position: | 1-173 |
| Cow position: | chr12:47415378-47415191 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-225 |
| Cow position: | chr12:5273791-5274034 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 1-324 |
| Cow position: | chr12:11101825-11101470 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 29, 316 |
| Conread position: | 1-329 |
| Cow position: | chr12:6186574-6186929 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 30, 281 |
| Conread position: | 1-329 |
| Cow position: | chr12:15719993-15720345 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 308 |
| Conread position: | 1-330 |
| Cow position: | chr12:12754589-12754940 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 29, 93 |
| Conread position: | 1-330 |
| Cow position: | chr12:20459145-20459503 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 29, 271 |
| Conread position: | 1-330 |
| Cow position: | chr12:31328753-31329113 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 315 |
| Conread position: | 1-330 |
| Cow position: | chr12:41337655-41338016 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-369 |
| Cow position: | chr12:5110490-5110888 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 313 |
| Conread position: | 3-307 |
| Cow position: | chr12:10988929-10988597 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 29, 81 |
| Conread position: | 3-326 |
| Cow position: | chr12:19198591-19198256 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 88 |
| Conread position: | 3-329 |
| Cow position: | chr12:31260860-31261192 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 175, 45 |
| Conread position: | 3-331 |
| Cow position: | chr12:15821294-15820947 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 29, 156 |
| Conread position: | 3-361 |
| Cow position: | chr12:21946550-21946185 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 6-269 |
| Cow position: | chr12:45540946-45540671 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 7-268 |
| Cow position: | chr12:25143184-25143442 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 169, 40 |
| Conread position: | 11-167 |
| Cow position: | chr12:6491760-6491921 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 11-174 |
| Cow position: | chr12:37697919-37698088 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 11-221 |
| Cow position: | chr12:747551-747333 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 11-330 |
| Cow position: | chr12:26869699-26870040 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 16-220 |
| Cow position: | chr12:33757756-33757946 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 21-225 |
| Cow position: | chr12:38774631-38774422 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 22-227 |
| Cow position: | chr12:30593567-30593779 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 23-174 |
| Cow position: | chr12:40514659-40514502 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 31-226 |
| Cow position: | chr12:5905065-5904861 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 31-327 |
| Cow position: | chr12:7885339-7885668 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 31-330 |
| Cow position: | chr12:10931620-10931301 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 31-330 |
| Cow position: | chr12:23475284-23474969 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 84 |
| Conread position: | 31-330 |
| Cow position: | chr12:24028949-24029262 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 279 |
| Conread position: | 31-330 |
| Cow position: | chr12:25313179-25313497 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 31-330 |
| Cow position: | chr12:32657080-32656765 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 32-172 |
| Cow position: | chr12:7651306-7651447 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-176 |
| Cow position: | chr12:28708092-28708240 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 32-205 |
| Cow position: | chr12:6404254-6404437 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-209 |
| Cow position: | chr12:20317224-20317390 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 32-211 |
| Cow position: | chr12:21723647-21723456 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 120 |
| Conread position: | 32-212 |
| Cow position: | chr12:20218029-20217838 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 32-213 |
| Cow position: | chr12:1849574-1849772 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 32-220 |
| Cow position: | chr12:24756012-24756211 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 32-222 |
| Cow position: | chr12:22286401-22286601 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 15, 165 |
| Conread position: | 32-223 |
| Cow position: | chr12:19040336-19040523 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 32-224 |
| Cow position: | chr12:44766365-44766162 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-225 |
| Cow position: | chr12:5800313-5800110 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 32-225 |
| Cow position: | chr12:14940498-14940295 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 32-225 |
| Cow position: | chr12:19453062-19452858 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 32-225 |
| Cow position: | chr12:26268683-26268886 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-225 |
| Cow position: | chr12:27852121-27852320 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-225 |
| Cow position: | chr12:40867866-40867663 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-232 |
| Cow position: | chr12:36149140-36149351 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-250 |
| Cow position: | chr12:32900619-32900856 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-251 |
| Cow position: | chr12:31533310-31533546 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-260 |
| Cow position: | chr12:1855326-1855572 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 233 |
| Conread position: | 32-260 |
| Cow position: | chr12:10790713-10790960 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-260 |
| Cow position: | chr12:35163316-35163064 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-261 |
| Cow position: | chr12:15939348-15939586 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 32-264 |
| Cow position: | chr12:30141946-30141711 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 9 |
| Conread position: | 32-274 |
| Cow position: | chr12:17787108-17787369 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-310 |
| Cow position: | chr12:19873092-19872821 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 32-318 |
| Cow position: | chr12:25096735-25097037 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 32-324 |
| Cow position: | chr12:8841522-8841836 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-324 |
| Cow position: | chr12:17663484-17663184 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 152 |
| Conread position: | 32-324 |
| Cow position: | chr12:27506116-27506427 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 17, 272 |
| Conread position: | 32-326 |
| Cow position: | chr12:21057183-21057486 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 32-327 |
| Cow position: | chr12:40306799-40306518 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 57 |
| Conread position: | 32-328 |
| Cow position: | chr12:15231560-15231253 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 32-328 |
| Cow position: | chr12:21075353-21075054 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 32-329 |
| Cow position: | chr12:1055976-1056290 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 15, 270 |
| Conread position: | 32-329 |
| Cow position: | chr12:2229104-2228788 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr12:5107591-5107275 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr12:7674435-7674119 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr12:8839787-8839471 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr12:10076191-10075879 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 239 |
| Conread position: | 32-329 |
| Cow position: | chr12:12177702-12178018 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 15, 253 |
| Conread position: | 32-329 |
| Cow position: | chr12:14214594-14214278 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr12:14568291-14568597 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 15, 220 |
| Conread position: | 32-329 |
| Cow position: | chr12:16301805-16302121 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 272 |
| Conread position: | 32-329 |
| Cow position: | chr12:17981927-17981618 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 15, 134 |
| Conread position: | 32-329 |
| Cow position: | chr12:21452444-21452760 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr12:21665671-21665353 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 274 |
| Conread position: | 32-329 |
| Cow position: | chr12:22517316-22517635 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 232 |
| Conread position: | 32-329 |
| Cow position: | chr12:24558105-24557795 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 84 |
| Conread position: | 32-329 |
| Cow position: | chr12:27957992-27958308 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr12:31027287-31027602 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr12:32758229-32757914 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 32-329 |
| Cow position: | chr12:34177088-34176772 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr12:36445918-36445604 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 32-329 |
| Cow position: | chr12:38893897-38893581 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 32-329 |
| Cow position: | chr12:39930698-39930386 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-330 |
| Cow position: | chr12:1093434-1093118 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 15, 151 |
| Conread position: | 32-330 |
| Cow position: | chr12:3070395-3070074 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 289 |
| Conread position: | 32-330 |
| Cow position: | chr12:3180942-3180625 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-330 |
| Cow position: | chr12:5713494-5713180 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 52 |
| Conread position: | 32-330 |
| Cow position: | chr12:8172438-8172124 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 260 |
| Conread position: | 32-330 |
| Cow position: | chr12:9988167-9988470 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 32-330 |
| Cow position: | chr12:12928377-12928690 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr12:18586206-18585889 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr12:21212317-21212000 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr12:21432875-21432557 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 273 |
| Conread position: | 32-330 |
| Cow position: | chr12:21611130-21610819 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 32-330 |
| Cow position: | chr12:22748749-22748431 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr12:22979360-22979675 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr12:23137795-23138112 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr12:24206063-24205751 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 15, 152 |
| Conread position: | 32-330 |
| Cow position: | chr12:24981240-24980937 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 32-330 |
| Cow position: | chr12:25265800-25266117 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr12:27994634-27994317 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr12:28012698-28013015 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr12:28571905-28571600 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 13, 164 |
| Conread position: | 32-330 |
| Cow position: | chr12:28763482-28763797 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 15, 135 |
| Conread position: | 32-330 |
| Cow position: | chr12:32147096-32147413 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 17, 272 |
| Conread position: | 32-330 |
| Cow position: | chr12:33297162-33296849 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 32-330 |
| Cow position: | chr12:35547602-35547912 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 32-330 |
| Cow position: | chr12:36287478-36287796 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 275 |
| Conread position: | 32-330 |
| Cow position: | chr12:43681537-43681221 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-330 |
| Cow position: | chr12:46111584-46111901 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 272 |
| Conread position: | 32-337 |
| Cow position: | chr12:13042707-13043032 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 273 |
| Conread position: | 32-369 |
| Cow position: | chr12:25260219-25260558 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 150 |
| Conread position: | 33-328 |
| Cow position: | chr12:22594286-22593983 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 33-329 |
| Cow position: | chr12:249789-250103 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 33-330 |
| Cow position: | chr12:25148086-25148402 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 14, 271 |
| Conread position: | 34-330 |
| Cow position: | chr12:22202150-22202465 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 270 |
| Conread position: | 35-225 |
| Cow position: | chr12:17969491-17969299 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 35-259 |
| Cow position: | chr12:22566848-22566616 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 200 |
| Conread position: | 35-330 |
| Cow position: | chr12:3716746-3717057 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 35-330 |
| Cow position: | chr12:32011249-32011561 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 35-330 |
| Cow position: | chr12:41973246-41973556 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 37-176 |
| Cow position: | chr12:19868757-19868612 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 37-321 |
| Cow position: | chr12:6954839-6954547 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 6 |
| Conread position: | 38-225 |
| Cow position: | chr12:14522901-14522708 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 38-310 |
| Cow position: | chr12:23378643-23378362 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 5 |
| Conread position: | 38-329 |
| Cow position: | chr12:32849087-32848783 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 38-330 |
| Cow position: | chr12:758932-758637 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 38-330 |
| Cow position: | chr12:22480649-22480341 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 46, 5 |
| Conread position: | 43-321 |
| Cow position: | chr12:3364408-3364112 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 260 |
| Conread position: | 43-329 |
| Cow position: | chr12:259251-258947 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 44, 260 |
| Conread position: | 52-330 |
| Cow position: | chr12:30687250-30686958 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 54-330 |
| Cow position: | chr12:21313928-21314213 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 122, 29 |
| Conread position: | 56-330 |
| Cow position: | chr12:19871718-19871429 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 61-305 |
| Cow position: | chr12:11582659-11582401 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 70-330 |
| Cow position: | chr12:21904847-21904575 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 70-330 |
| Cow position: | chr12:23159025-23159286 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 71-329 |
| Cow position: | chr12:8774153-8773882 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 224 |
| Conread position: | 72-329 |
| Cow position: | chr12:36568858-36569127 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 74-258 |
| Cow position: | chr12:19972227-19972039 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 82-329 |
| Cow position: | chr12:19852730-19852475 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 97, 55 |
| Conread position: | 83-330 |
| Cow position: | chr12:19155382-19155643 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 19, 174 |
| Conread position: | 85-318 |
| Cow position: | chr12:3094148-3094395 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 85-329 |
| Cow position: | chr12:31828975-31829232 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 213 |
| Conread position: | 89-310 |
| Cow position: | chr12:23441469-23441703 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 89, 209 |
| Conread position: | 94-276 |
| Cow position: | chr12:15760506-15760311 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 95-328 |
| Cow position: | chr12:47803617-47803391 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 98-330 |
| Cow position: | chr12:21484863-21484627 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 80, 109 |
| Conread position: | 99-329 |
| Cow position: | chr12:61747-61990 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 79, 199 |
| Conread position: | 99-329 |
| Cow position: | chr12:33925237-33925480 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 79, 199 |
| Conread position: | 100-259 |
| Cow position: | chr12:10490307-10490137 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 108-259 |
| Cow position: | chr12:19862138-19861987 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 130, 115 |
| Conread position: | 116-329 |
| Cow position: | chr12:21888599-21888825 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 60, 182 |
| Conread position: | 124-330 |
| Cow position: | chr12:2242555-2242771 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 333-553 |
| Cow position: | chr12:19198170-19197948 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 352-553 |
| Cow position: | chr12:41338123-41338330 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 130 |
Show alignments to all cow chromosomes.