Cow genome map
| Conread name: | End3-UMC-pd6end1-003-c12 |
| Conread position: | 1-174 |
| Cow position: | chr17:28024436-28024622 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-225 |
| Cow position: | chr17:997724-997968 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-322 |
| Cow position: | chr17:731043-731390 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-330 |
| Cow position: | chr17:14006862-14006521 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 34, 215 |
| Conread position: | 1-330 |
| Cow position: | chr17:18099621-18099980 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 28, 314 |
| Conread position: | 3-322 |
| Cow position: | chr17:50660-50997 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 186 |
| Conread position: | 3-329 |
| Cow position: | chr17:29083617-29083272 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 29, 152 |
| Conread position: | 3-330 |
| Cow position: | chr17:4211385-4211024 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 29, 309 |
| Conread position: | 6-227 |
| Cow position: | chr17:5748408-5748636 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 63 |
| Conread position: | 6-243 |
| Cow position: | chr17:2033944-2033681 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 7-330 |
| Cow position: | chr17:144768-145105 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 50, 285 |
| Conread position: | 8-330 |
| Cow position: | chr17:19369874-19369537 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 11-330 |
| Cow position: | chr17:23337629-23337955 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 13-329 |
| Cow position: | chr17:30182153-30182485 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 74, 5 |
| Conread position: | 14-275 |
| Cow position: | chr17:16216858-16216584 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 22-264 |
| Cow position: | chr17:18340058-18340316 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 23-328 |
| Cow position: | chr17:24785608-24785286 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 23-330 |
| Cow position: | chr17:16118053-16118365 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 153, 20 |
| Conread position: | 31-235 |
| Cow position: | chr17:41014572-41014358 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 31-329 |
| Cow position: | chr17:26829332-26829649 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 273 |
| Conread position: | 31-330 |
| Cow position: | chr17:1456968-1457285 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 32-149 |
| Cow position: | chr17:4123388-4123510 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 104 |
| Conread position: | 32-196 |
| Cow position: | chr17:22151207-22151036 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 32-200 |
| Cow position: | chr17:5899159-5899323 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 32-214 |
| Cow position: | chr17:10843684-10843493 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 13, 153 |
| Conread position: | 32-219 |
| Cow position: | chr17:24502918-24502721 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-225 |
| Cow position: | chr17:3197220-3197422 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 32-225 |
| Cow position: | chr17:20272155-20272355 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 32-248 |
| Cow position: | chr17:29074968-29075191 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-260 |
| Cow position: | chr17:3652316-3652563 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-260 |
| Cow position: | chr17:13725673-13725428 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 32-260 |
| Cow position: | chr17:15094051-15094298 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-260 |
| Cow position: | chr17:25834828-25834581 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-275 |
| Cow position: | chr17:36159629-36159885 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 32-316 |
| Cow position: | chr17:33792489-33792182 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 174 |
| Conread position: | 32-318 |
| Cow position: | chr17:16447070-16447376 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 8, 263 |
| Conread position: | 32-319 |
| Cow position: | chr17:6071950-6071644 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 280 |
| Conread position: | 32-320 |
| Cow position: | chr17:36265870-36266166 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 32-321 |
| Cow position: | chr17:15558983-15558674 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-321 |
| Cow position: | chr17:29079758-29079479 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 32-324 |
| Cow position: | chr17:29041494-29041799 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 293 |
| Conread position: | 32-327 |
| Cow position: | chr17:3305996-3305672 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-327 |
| Cow position: | chr17:20091215-20091512 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 88 |
| Conread position: | 32-328 |
| Cow position: | chr17:16505336-16505651 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-328 |
| Cow position: | chr17:18591812-18591519 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 32-328 |
| Cow position: | chr17:29156792-29156469 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 32-328 |
| Cow position: | chr17:29471841-29471535 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 123 |
| Conread position: | 32-329 |
| Cow position: | chr17:1970562-1970246 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr17:2079041-2078736 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 32-329 |
| Cow position: | chr17:2839423-2839120 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 32-329 |
| Cow position: | chr17:5806078-5806394 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr17:6612433-6612117 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr17:8205345-8205041 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 8, 48 |
| Conread position: | 32-329 |
| Cow position: | chr17:8450121-8449808 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 32-329 |
| Cow position: | chr17:11913340-11913654 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 32-329 |
| Cow position: | chr17:20391185-20390869 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 19, 272 |
| Conread position: | 32-329 |
| Cow position: | chr17:20546548-20546232 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr17:21716873-21716557 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr17:29213036-29212728 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 127 |
| Conread position: | 32-329 |
| Cow position: | chr17:36284678-36284362 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr17:36790477-36790165 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 275 |
| Conread position: | 32-329 |
| Cow position: | chr17:37528561-37528877 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr17:39823783-39824099 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-329 |
| Cow position: | chr17:41892969-41893294 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 13, 297 |
| Conread position: | 32-330 |
| Cow position: | chr17:184558-184241 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr17:1568811-1569120 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 32-330 |
| Cow position: | chr17:2201708-2201391 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr17:2244662-2244972 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 32-330 |
| Cow position: | chr17:2265599-2265283 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 15, 271 |
| Conread position: | 32-330 |
| Cow position: | chr17:3781061-3780750 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 32-330 |
| Cow position: | chr17:4635379-4635681 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 32-330 |
| Cow position: | chr17:6956050-6955733 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr17:8212465-8212155 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 32-330 |
| Cow position: | chr17:11083724-11084041 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr17:13910206-13910514 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 15, 222 |
| Conread position: | 32-330 |
| Cow position: | chr17:14028936-14029252 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 123 |
| Conread position: | 32-330 |
| Cow position: | chr17:14243243-14242920 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 278 |
| Conread position: | 32-330 |
| Cow position: | chr17:15328691-15328375 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 32-330 |
| Cow position: | chr17:15374794-15374499 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 32-330 |
| Cow position: | chr17:15439202-15438885 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 32-330 |
| Cow position: | chr17:15854144-15853828 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 32-330 |
| Cow position: | chr17:16854690-16855003 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 269 |
| Conread position: | 32-330 |
| Cow position: | chr17:16903990-16903678 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr17:17128415-17128099 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 15, 170 |
| Conread position: | 32-330 |
| Cow position: | chr17:17958007-17957691 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 32-330 |
| Cow position: | chr17:19214999-19215301 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 220 |
| Conread position: | 32-330 |
| Cow position: | chr17:20078268-20078573 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 32-330 |
| Cow position: | chr17:20084410-20084719 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 32-330 |
| Cow position: | chr17:20093754-20094064 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 32-330 |
| Cow position: | chr17:21666410-21666098 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 15, 267 |
| Conread position: | 32-330 |
| Cow position: | chr17:22134606-22134291 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 238 |
| Conread position: | 32-330 |
| Cow position: | chr17:22563556-22563239 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 241 |
| Conread position: | 32-330 |
| Cow position: | chr17:24026574-24026889 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 15, 270 |
| Conread position: | 32-330 |
| Cow position: | chr17:25739707-25739390 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 32-330 |
| Cow position: | chr17:29824549-29824867 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 15, 274 |
| Conread position: | 32-330 |
| Cow position: | chr17:34235840-34236157 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 19, 272 |
| Conread position: | 32-330 |
| Cow position: | chr17:38829290-38828976 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 15, 261 |
| Conread position: | 32-332 |
| Cow position: | chr17:15335044-15335347 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 11 |
| Conread position: | 32-369 |
| Cow position: | chr17:23321009-23321366 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 243 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 15, 249 |
| Conread position: | 33-176 |
| Cow position: | chr17:39484917-39484771 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 33-225 |
| Cow position: | chr17:20083028-20083220 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 8 |
| Conread position: | 33-259 |
| Cow position: | chr17:148318-148088 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 33-260 |
| Cow position: | chr17:979773-980021 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 33-269 |
| Cow position: | chr17:19133418-19133656 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 33-329 |
| Cow position: | chr17:20033814-20033529 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 33-330 |
| Cow position: | chr17:8223115-8222799 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 14, 271 |
| Conread position: | 33-330 |
| Cow position: | chr17:20209465-20209787 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 210 |
| Conread position: | 33-330 |
| Cow position: | chr17:22774053-22774356 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 237 |
| Conread position: | 34-198 |
| Cow position: | chr17:2081359-2081189 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 34-200 |
| Cow position: | chr17:28539400-28539240 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 34-216 |
| Cow position: | chr17:923030-922839 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 34-312 |
| Cow position: | chr17:17221717-17221425 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 35-225 |
| Cow position: | chr17:1883651-1883452 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 35-225 |
| Cow position: | chr17:10445564-10445372 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 35-230 |
| Cow position: | chr17:24618183-24617988 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 65, 8 |
| Conread position: | 36-280 |
| Cow position: | chr17:6081898-6081640 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 38-297 |
| Cow position: | chr17:40802152-40801879 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 109 |
| Conread position: | 38-324 |
| Cow position: | chr17:33934412-33934740 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 246 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 46, 5 |
| Conread position: | 38-327 |
| Cow position: | chr17:38629528-38629253 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 6 |
| Conread position: | 38-330 |
| Cow position: | chr17:37415490-37415794 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 5 |
| Conread position: | 43-330 |
| Cow position: | chr17:16869898-16870183 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 39, 165 |
| Conread position: | 44-225 |
| Cow position: | chr17:24293506-24293321 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 50-323 |
| Cow position: | chr17:4063723-4063439 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 129, 48 |
| Conread position: | 50-329 |
| Cow position: | chr17:18324026-18324309 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 71 |
| Conread position: | 53-276 |
| Cow position: | chr17:23884419-23884648 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 109 |
| Conread position: | 62-330 |
| Cow position: | chr17:31233046-31232771 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 14, 166 |
| Conread position: | 66-205 |
| Cow position: | chr17:34317407-34317550 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 70-289 |
| Cow position: | chr17:18471542-18471306 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 70-330 |
| Cow position: | chr17:2583759-2583486 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 111 |
| Conread position: | 72-259 |
| Cow position: | chr17:42313249-42313049 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 72-330 |
| Cow position: | chr17:18198719-18198448 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 73-327 |
| Cow position: | chr17:33289617-33289865 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 75-276 |
| Cow position: | chr17:9001681-9001477 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 145, 100 |
| Conread position: | 76-323 |
| Cow position: | chr17:44482209-44481945 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 80-222 |
| Cow position: | chr17:34000017-34000154 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 83-329 |
| Cow position: | chr17:21304642-21304383 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 83-330 |
| Cow position: | chr17:4085416-4085161 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 85-330 |
| Cow position: | chr17:11619547-11619291 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 107 |
| Conread position: | 85-330 |
| Cow position: | chr17:18201073-18200831 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 91, 145 |
| Conread position: | 91-330 |
| Cow position: | chr17:40811089-40810845 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 127, 62 |
| Conread position: | 96-330 |
| Cow position: | chr17:138943-138702 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 82, 196 |
| Conread position: | 96-330 |
| Cow position: | chr17:1311422-1311668 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 200 |
| Conread position: | 99-329 |
| Cow position: | chr17:15708655-15708898 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 199 |
| Conread position: | 99-330 |
| Cow position: | chr17:29950550-29950309 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 199 |
| Conread position: | 102-329 |
| Cow position: | chr17:29897970-29897737 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 103-289 |
| Cow position: | chr17:32407350-32407548 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 192 |
| Conread position: | 107-329 |
| Cow position: | chr17:2521110-2521345 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 191 |
| Conread position: | 109-329 |
| Cow position: | chr17:5043264-5043498 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 110-259 |
| Cow position: | chr17:12290159-12290322 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 325-555 |
| Cow position: | chr17:1565200-1564959 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 363-555 |
| Cow position: | chr17:41012505-41012308 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.