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Cow genome map

           
Conread name:
           
End3-UMC-pd6end1-003-c12
        

               
Conread position:
               
1-157
               

               
Cow position:
               
chr29:35291250-35291083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:24420793-24420553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr29:32942240-32941951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr29:22279967-22279609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 277
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr29:28656778-28657134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
34, 311
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr29:35955729-35956068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 139
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr29:32175850-32175583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr29:18365034-18365341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr29:30106267-30106611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr29:24578219-24577893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 42
               

               
Conread position:
               
7-216
               

               
Cow position:
               
chr29:23984591-23984805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
7-330
               

               
Cow position:
               
chr29:9939210-9939567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
11-259
               

               
Cow position:
               
chr29:7604971-7604708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
11-330
               

               
Cow position:
               
chr29:2744932-2745268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
18-292
               

               
Cow position:
               
chr29:14116378-14116091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 273
               

               
Conread position:
               
22-330
               

               
Cow position:
               
chr29:20254722-20254400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
23-221
               

               
Cow position:
               
chr29:15693894-15694091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
23-329
               

               
Cow position:
               
chr29:2837778-2838101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
23-329
               

               
Cow position:
               
chr29:16185221-16185544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
23-330
               

               
Cow position:
               
chr29:649595-649286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
27-330
               

               
Cow position:
               
chr29:10452261-10452582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
29-259
               

               
Cow position:
               
chr29:87661-87911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
31-194
               

               
Cow position:
               
chr29:28621919-28622087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
31-199
               

               
Cow position:
               
chr29:22935599-22935421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
31-231
               

               
Cow position:
               
chr29:16012423-16012626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
31-248
               

               
Cow position:
               
chr29:4519289-4519050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
16, 175
               

               
Conread position:
               
31-324
               

               
Cow position:
               
chr29:11786556-11786243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 276
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr29:3330144-3329827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 273
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr29:5961555-5961238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 273
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr29:28696828-28697145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
32-144
               

               
Cow position:
               
chr29:8667136-8667019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
32-205
               

               
Cow position:
               
chr29:799118-799295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
32-210
               

               
Cow position:
               
chr29:4200940-4200756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
32-216
               

               
Cow position:
               
chr29:32298278-32298084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-221
               

               
Cow position:
               
chr29:10652659-10652460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
32-222
               

               
Cow position:
               
chr29:13590392-13590592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr29:528966-529169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr29:15570084-15569881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr29:15698906-15699142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr29:29565789-29566026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr29:27310135-27310361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
32-259
               

               
Cow position:
               
chr29:735224-735469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr29:2461707-2461460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr29:13923629-13923382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr29:16042212-16041965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr29:19398210-19397964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr29:32329709-32329956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-262
               

               
Cow position:
               
chr29:37451631-37451388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 209
               

               
Conread position:
               
32-264
               

               
Cow position:
               
chr29:4480843-4481081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 202
               

               
Conread position:
               
32-270
               

               
Cow position:
               
chr29:17794554-17794297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
32-272
               

               
Cow position:
               
chr29:10841939-10842192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
32-272
               

               
Cow position:
               
chr29:32807910-32807659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
32-275
               

               
Cow position:
               
chr29:2367491-2367745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 117
               

               
Conread position:
               
32-275
               

               
Cow position:
               
chr29:2694251-2693990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-293
               

               
Cow position:
               
chr29:133515-133243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
32-310
               

               
Cow position:
               
chr29:13129103-13129375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
218, 19
               

               
Conread position:
               
32-317
               

               
Cow position:
               
chr29:19761609-19761307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 257
               

               
Conread position:
               
32-318
               

               
Cow position:
               
chr29:11365568-11365264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
12, 266
               

               
Conread position:
               
32-318
               

               
Cow position:
               
chr29:13027754-13027466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
166, 9
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr29:7664451-7664757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
32-324
               

               
Cow position:
               
chr29:4164239-4163928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-324
               

               
Cow position:
               
chr29:19891113-19890808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:727280-726964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:1688293-1687983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
15, 266
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:4875587-4875896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:6262459-6262774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:6935034-6934718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:7847942-7847627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
52, 271
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:10237107-10237432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
15, 179
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:10643864-10644179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 271
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:11119161-11119477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:12798135-12797817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:13623823-13624139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:15966003-15966319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:18011126-18010810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:20999754-20999450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:21227526-21227211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 271
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:21429313-21429625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:26263174-26262857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:27702628-27702312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 274
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:32292145-32291829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:32515879-32515563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:32556193-32556509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:34851305-34850993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 226
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:36209247-36208931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 234
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:40157295-40156979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
12, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:40294858-40294542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
12, 272
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr29:43692291-43691977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 269
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:44918-45230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 267
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:108929-108618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:607097-607412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:960749-960435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:1479002-1478685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:2298776-2299085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:2307552-2307236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
15, 288
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:5240946-5240628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
15, 271
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:5786045-5785728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:6218266-6218573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:7811645-7811963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 273
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:8623665-8623974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:9079253-9079563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:10032103-10032420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:10820164-10820481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:13128948-13128643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
15, 205
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:14037303-14037615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
19, 219
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:14208017-14208333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 182
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:14313598-14313915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 264
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:16065260-16064944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:19524589-19524905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 262
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:19619718-19620035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:19657432-19657115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:21445792-21446104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:23980256-23979944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:24983020-24983333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
15, 268
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:25928959-25929274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:26161284-26161599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 182
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:31765590-31765274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 108
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:32353146-32352831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 274
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:32732649-32732335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
15, 146
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:32800817-32800510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:34780434-34780752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 264
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:34794308-34794629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 266
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:34806285-34806588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:35076675-35076358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:35273488-35273805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:35739159-35739465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:38229554-38229241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:38349811-38350120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:39076168-39076485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:40498329-40498642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
15, 268
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:42255428-42255744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 271
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:43729388-43729075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 268
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr29:45462782-45462467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 177
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr29:15943891-15943585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
32-355
               

               
Cow position:
               
chr29:38409747-38409407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
33-216
               

               
Cow position:
               
chr29:16195159-16194968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
33-225
               

               
Cow position:
               
chr29:4120173-4119970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
33-319
               

               
Cow position:
               
chr29:10297315-10297617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 165
               

               
Conread position:
               
33-329
               

               
Cow position:
               
chr29:21474699-21474384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
14, 271
               

               
Conread position:
               
33-329
               

               
Cow position:
               
chr29:29505834-29506140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr29:3106838-3106539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr29:7427592-7427908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr29:42807533-42807220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 175
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr29:45650997-45651307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 292
               

               
Conread position:
               
34-287
               

               
Cow position:
               
chr29:10154583-10154333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 155
               

               
Conread position:
               
34-329
               

               
Cow position:
               
chr29:35265466-35265152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 270
               

               
Conread position:
               
34-330
               

               
Cow position:
               
chr29:30432646-30432958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 259
               

               
Conread position:
               
36-215
               

               
Cow position:
               
chr29:35434183-35433996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 114
               

               
Conread position:
               
37-259
               

               
Cow position:
               
chr29:40096066-40095837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
141, 6
               

               
Conread position:
               
37-330
               

               
Cow position:
               
chr29:7290087-7289783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
38-224
               

               
Cow position:
               
chr29:32286806-32286613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 5
               

               
Conread position:
               
38-264
               

               
Cow position:
               
chr29:11136567-11136807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
55, 5
               

               
Conread position:
               
38-289
               

               
Cow position:
               
chr29:35228216-35227955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
38-309
               

               
Cow position:
               
chr29:8589194-8589482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 5
               

               
Conread position:
               
38-329
               

               
Cow position:
               
chr29:7724204-7723901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
40, 5
               

               
Conread position:
               
38-329
               

               
Cow position:
               
chr29:32543680-32543373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr29:2103384-2103081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr29:32962850-32962549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr29:35002131-35002440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
38-359
               

               
Cow position:
               
chr29:32289931-32289591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 5
               

               
Conread position:
               
44-330
               

               
Cow position:
               
chr29:27259346-27259651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
55-318
               

               
Cow position:
               
chr29:6871760-6872036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
42, 204
               

               
Conread position:
               
55-330
               

               
Cow position:
               
chr29:32806587-32806303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 178
               

               
Conread position:
               
58-329
               

               
Cow position:
               
chr29:15941503-15941790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 206
               

               
Conread position:
               
59-330
               

               
Cow position:
               
chr29:14454734-14454460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 147
               

               
Conread position:
               
67-260
               

               
Cow position:
               
chr29:12852859-12852648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
67-329
               

               
Cow position:
               
chr29:40116821-40116539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
69-330
               

               
Cow position:
               
chr29:13849437-13849713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
70-329
               

               
Cow position:
               
chr29:15071969-15072246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 232
               

               
Conread position:
               
71-260
               

               
Cow position:
               
chr29:29701702-29701895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr29:36633856-36634115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
153, 10
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr29:17153742-17153474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 240
               

               
Conread position:
               
73-225
               

               
Cow position:
               
chr29:1605228-1605389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
79-322
               

               
Cow position:
               
chr29:27858049-27857813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 5
               

               
Conread position:
               
81-330
               

               
Cow position:
               
chr29:9639033-9639295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
87-330
               

               
Cow position:
               
chr29:13099663-13099404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 222
               

               
Conread position:
               
89-330
               

               
Cow position:
               
chr29:32316557-32316305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 209
               

               
Conread position:
               
94-329
               

               
Cow position:
               
chr29:4864803-4864554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
99-329
               

               
Cow position:
               
chr29:16097290-16097047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 199
               

               
Conread position:
               
99-329
               

               
Cow position:
               
chr29:24806933-24806690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 199
               

               
Conread position:
               
104-329
               

               
Cow position:
               
chr29:24951942-24951705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
104-330
               

               
Cow position:
               
chr29:43517508-43517747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
110-329
               

               
Cow position:
               
chr29:22746367-22746135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
68, 188
               

               
Conread position:
               
119-369
               

               
Cow position:
               
chr29:21255409-21255147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 243
               

               
Conread position:
               
325-549
               

               
Cow position:
               
chr29:32962475-32962235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
335-555
               

               
Cow position:
               
chr29:12797732-12797501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 145
               
Show alignments to all cow chromosomes.