Cow genome map
| Conread name: | End3-UMC-pd6end2-002-b10 |
| Conread position: | 125-249 |
| Cow position: | chr3:84112560-84112433 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 134-256 |
| Cow position: | chr3:891295-891415 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 137-256 |
| Cow position: | chr3:8924075-8924193 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 138-233 |
| Cow position: | chr3:58632596-58632691 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-256 |
| Cow position: | chr3:41718426-41718542 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 138-256 |
| Cow position: | chr3:50281717-50281600 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 138-256 |
| Cow position: | chr3:50614675-50614794 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 138-258 |
| Cow position: | chr3:20092491-20092371 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-258 |
| Cow position: | chr3:25027436-25027555 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 140-240 |
| Cow position: | chr3:74912890-74912990 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-241 |
| Cow position: | chr3:53588347-53588247 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 140-246 |
| Cow position: | chr3:10431636-10431742 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-248 |
| Cow position: | chr3:18865996-18865888 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-248 |
| Cow position: | chr3:25250940-25251049 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 140-254 |
| Cow position: | chr3:15221481-15221368 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 140-254 |
| Cow position: | chr3:23111476-23111364 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 140-255 |
| Cow position: | chr3:70354201-70354086 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 16 |
| Conread position: | 140-256 |
| Cow position: | chr3:22953847-22953733 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 140-256 |
| Cow position: | chr3:25076130-25076014 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-256 |
| Cow position: | chr3:30839279-30839394 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 140-256 |
| Cow position: | chr3:54126220-54126107 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 140-256 |
| Cow position: | chr3:61411157-61411273 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-256 |
| Cow position: | chr3:74611600-74611716 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-257 |
| Cow position: | chr3:9127398-9127281 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-258 |
| Cow position: | chr3:8746195-8746080 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 140-258 |
| Cow position: | chr3:9074309-9074191 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-243 |
| Cow position: | chr3:34675760-34675862 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-253 |
| Cow position: | chr3:3736336-3736449 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 141-257 |
| Cow position: | chr3:76913051-76913168 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 141-258 |
| Cow position: | chr3:14505877-14505760 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-258 |
| Cow position: | chr3:55373531-55373412 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 142-254 |
| Cow position: | chr3:8752826-8752935 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 142-256 |
| Cow position: | chr3:60145254-60145367 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 142-257 |
| Cow position: | chr3:18214097-18213985 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 142-257 |
| Cow position: | chr3:41550336-41550222 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 142-258 |
| Cow position: | chr3:24300399-24300520 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 142-258 |
| Cow position: | chr3:24538911-24539027 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 143-255 |
| Cow position: | chr3:76614940-76615051 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 143-256 |
| Cow position: | chr3:54340382-54340270 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 144-256 |
| Cow position: | chr3:43590935-43591047 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-257 |
| Cow position: | chr3:77297274-77297164 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 148-257 |
| Cow position: | chr3:63039145-63039252 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.