Cow genome map
| Conread name: | End3-UMC-pd6end2-002-b10 |
| Conread position: | 109-258 |
| Cow position: | chr4:45115757-45115608 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 125-256 |
| Cow position: | chr4:9912287-9912159 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 125-256 |
| Cow position: | chr4:22235366-22235494 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 138-255 |
| Cow position: | chr4:37611235-37611121 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 138-256 |
| Cow position: | chr4:9548006-9548121 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 139-256 |
| Cow position: | chr4:23758855-23758970 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 140-243 |
| Cow position: | chr4:65116141-65116038 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-246 |
| Cow position: | chr4:5798019-5798123 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 140-254 |
| Cow position: | chr4:60030959-60031070 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 140-255 |
| Cow position: | chr4:51433463-51433578 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-256 |
| Cow position: | chr4:22249396-22249281 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 140-256 |
| Cow position: | chr4:45919087-45919202 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 140-256 |
| Cow position: | chr4:50769712-50769598 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 140-256 |
| Cow position: | chr4:65604419-65604306 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 140-257 |
| Cow position: | chr4:10463874-10463757 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-257 |
| Cow position: | chr4:10992148-10992031 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-257 |
| Cow position: | chr4:37035182-37035065 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-257 |
| Cow position: | chr4:52226056-52226173 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-257 |
| Cow position: | chr4:63417648-63417533 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 140-258 |
| Cow position: | chr4:21073099-21072984 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 140-258 |
| Cow position: | chr4:25972951-25973069 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 33 |
| Conread position: | 140-258 |
| Cow position: | chr4:35471371-35471488 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 140-258 |
| Cow position: | chr4:36813431-36813547 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 140-258 |
| Cow position: | chr4:40433849-40433735 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 140-258 |
| Cow position: | chr4:44279883-44279765 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-246 |
| Cow position: | chr4:49658603-49658708 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-252 |
| Cow position: | chr4:21365457-21365567 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 141-255 |
| Cow position: | chr4:36945140-36945026 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-256 |
| Cow position: | chr4:62411907-62412021 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 141-257 |
| Cow position: | chr4:30671361-30671245 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-258 |
| Cow position: | chr4:31172726-31172843 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-246 |
| Cow position: | chr4:9800057-9800161 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-254 |
| Cow position: | chr4:24433034-24433146 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-255 |
| Cow position: | chr4:10837327-10837214 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-257 |
| Cow position: | chr4:10836232-10836346 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 143-256 |
| Cow position: | chr4:24187546-24187433 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-258 |
| Cow position: | chr4:47445970-47446078 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.