Cow genome map
| Conread name: | End3-UMC-pd6end2-002-b10 |
| Conread position: | 101-256 |
| Cow position: | chr6:30160379-30160534 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 6, 25 |
| Conread position: | 123-258 |
| Cow position: | chr6:23986380-23986247 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 104 |
| Conread position: | 135-255 |
| Cow position: | chr6:22969154-22969272 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 138-255 |
| Cow position: | chr6:37054083-37054199 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 138-255 |
| Cow position: | chr6:50287678-50287561 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-258 |
| Cow position: | chr6:31425460-31425341 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 139-256 |
| Cow position: | chr6:4023201-4023318 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-243 |
| Cow position: | chr6:15753944-15754044 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 140-246 |
| Cow position: | chr6:1907620-1907726 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-255 |
| Cow position: | chr6:15782414-15782299 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-256 |
| Cow position: | chr6:13718864-13718981 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 140-256 |
| Cow position: | chr6:15997117-15997004 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 140-256 |
| Cow position: | chr6:33985326-33985439 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 140-256 |
| Cow position: | chr6:35774883-35774766 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 140-256 |
| Cow position: | chr6:38914541-38914657 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-256 |
| Cow position: | chr6:53673964-53674077 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 140-257 |
| Cow position: | chr6:24557979-24558095 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 140-257 |
| Cow position: | chr6:28164925-28165042 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-258 |
| Cow position: | chr6:20255310-20255188 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 140-258 |
| Cow position: | chr6:24583131-24583016 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 140-258 |
| Cow position: | chr6:38453681-38453563 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 75, 88 |
| Conread position: | 140-258 |
| Cow position: | chr6:51840379-51840504 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 141-248 |
| Cow position: | chr6:59496320-59496423 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 141-256 |
| Cow position: | chr6:47192423-47192309 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 142-256 |
| Cow position: | chr6:827605-827491 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-258 |
| Cow position: | chr6:2324121-2324006 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 142-258 |
| Cow position: | chr6:37612208-37612324 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 143-249 |
| Cow position: | chr6:7707236-7707343 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 143-258 |
| Cow position: | chr6:11790078-11790194 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 145-256 |
| Cow position: | chr6:31225813-31225924 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.