Cow genome map
| Conread name: | End3-UMC-pd6end2-002-b10 |
| Conread position: | 132-254 |
| Cow position: | chr8:51959344-51959223 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 136-258 |
| Cow position: | chr8:9528354-9528234 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 138-246 |
| Cow position: | chr8:34318002-34317895 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 97, 87 |
| Conread position: | 138-256 |
| Cow position: | chr8:37114841-37114726 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 138-256 |
| Cow position: | chr8:54195867-54195987 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 138-257 |
| Cow position: | chr8:15969499-15969378 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 139-235 |
| Cow position: | chr8:11249410-11249313 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 139-243 |
| Cow position: | chr8:35924595-35924491 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-256 |
| Cow position: | chr8:60949672-60949555 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-258 |
| Cow position: | chr8:942880-943000 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 139-258 |
| Cow position: | chr8:20052850-20052730 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 139-258 |
| Cow position: | chr8:55305152-55305271 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-246 |
| Cow position: | chr8:26922695-26922798 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 140-246 |
| Cow position: | chr8:55829275-55829171 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 140-249 |
| Cow position: | chr8:6469095-6468986 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-251 |
| Cow position: | chr8:13738583-13738693 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 140-254 |
| Cow position: | chr8:20682465-20682583 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 140-255 |
| Cow position: | chr8:18743567-18743679 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 140-255 |
| Cow position: | chr8:57420968-57421082 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 140-256 |
| Cow position: | chr8:18175932-18175818 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 140-256 |
| Cow position: | chr8:27053531-27053418 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 140-256 |
| Cow position: | chr8:35218437-35218553 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-256 |
| Cow position: | chr8:36471612-36471727 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 140-256 |
| Cow position: | chr8:46203337-46203453 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-257 |
| Cow position: | chr8:23030703-23030818 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 90 |
| Conread position: | 140-257 |
| Cow position: | chr8:24547087-24547204 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-258 |
| Cow position: | chr8:13900469-13900589 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 140-258 |
| Cow position: | chr8:36505447-36505564 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 140-258 |
| Cow position: | chr8:37487226-37487108 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-258 |
| Cow position: | chr8:41318107-41318225 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-258 |
| Cow position: | chr8:51904967-51904849 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 140-258 |
| Cow position: | chr8:59507006-59506892 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 141-249 |
| Cow position: | chr8:13975963-13976070 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 141-256 |
| Cow position: | chr8:26451194-26451311 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 142-255 |
| Cow position: | chr8:53866173-53866287 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 142-256 |
| Cow position: | chr8:47707923-47708037 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-258 |
| Cow position: | chr8:25417427-25417313 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 143-257 |
| Cow position: | chr8:28221492-28221380 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 143-257 |
| Cow position: | chr8:39017779-39017893 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-258 |
| Cow position: | chr8:15686324-15686212 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-255 |
| Cow position: | chr8:37509137-37509029 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.