Cow genome map


           Conread name:
           End3-UMC-pd6end2-011-b05
        

               Conread position:
               1-390
               

               Cow position:
               chr2:16415287-16415673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 31
               

               Conread position:
               1-402
               

               Cow position:
               chr2:68051585-68051203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               122, 49
               

               Conread position:
               2-380
               

               Cow position:
               chr2:40773089-40773458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               121, 49
               

               Conread position:
               2-395
               

               Cow position:
               chr2:37396549-37396928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               117, 78
               

               Conread position:
               3-380
               

               Cow position:
               chr2:25216643-25217012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 48
               

               Conread position:
               4-403
               

               Cow position:
               chr2:58770295-58770675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               119, 39
               

               Conread position:
               90-380
               

               Cow position:
               chr2:24036364-24036082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               107-369
               

               Cow position:
               chr2:70752269-70752534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 66
               

               Conread position:
               109-397
               

               Cow position:
               chr2:54726871-54726578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               117-406
               

               Cow position:
               chr2:50561765-50562070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               37, 294
               

               Conread position:
               135-388
               

               Cow position:
               chr2:3544831-3544583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 7
               

               Conread position:
               176-376
               

               Cow position:
               chr2:26340264-26340063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               20, 0
               
Show alignments to all cow chromosomes.