Cow genome map
| Conread name: | Fat1-C95008 |
| Conread position: | 1-85 |
| Cow position: | chr13:37621395-37621479 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 74 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-147 |
| Cow position: | chr13:57494225-57494373 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 1-149 |
| Cow position: | chr13:28520462-28520610 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 1-154 |
| Cow position: | chr13:20473717-20473882 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-154 |
| Cow position: | chr13:58763653-58763816 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-155 |
| Cow position: | chr13:15194770-15194929 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:84543-84382 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-156 |
| Cow position: | chr13:8374808-8374970 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 1-156 |
| Cow position: | chr13:18058285-18058456 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:18181810-18181960 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 1-156 |
| Cow position: | chr13:21188333-21188173 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:21277502-21277666 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:34261196-34261026 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:37554909-37555080 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:56686396-56686234 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 140 |
| Conread position: | 2-149 |
| Cow position: | chr13:25504496-25504333 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-156 |
| Cow position: | chr13:3594285-3594123 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-156 |
| Cow position: | chr13:7149184-7149028 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 131 |
| Conread position: | 2-156 |
| Cow position: | chr13:45439486-45439323 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-156 |
| Cow position: | chr13:52891192-52891041 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 130, 6 |
| Conread position: | 2-156 |
| Cow position: | chr13:55494562-55494728 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 140 |
| Conread position: | 5-149 |
| Cow position: | chr13:19007891-19007741 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 82, 8 |
| Conread position: | 5-149 |
| Cow position: | chr13:48375672-48375817 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 5-149 |
| Cow position: | chr13:57985977-57986134 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 5-154 |
| Cow position: | chr13:56535415-56535260 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-156 |
| Cow position: | chr13:17745204-17745049 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 5-156 |
| Cow position: | chr13:21235710-21235877 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 5-156 |
| Cow position: | chr13:22085785-22085941 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 131 |
| Conread position: | 5-156 |
| Cow position: | chr13:45073294-45073455 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 7-147 |
| Cow position: | chr13:43480016-43479861 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-148 |
| Cow position: | chr13:48165470-48165624 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 7-156 |
| Cow position: | chr13:21425871-21426028 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 11-156 |
| Cow position: | chr13:34299907-34300057 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 11-156 |
| Cow position: | chr13:45073962-45074112 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 13-156 |
| Cow position: | chr13:6980870-6980716 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 13-156 |
| Cow position: | chr13:15069908-15069763 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 14-137 |
| Cow position: | chr13:13211833-13211698 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-149 |
| Cow position: | chr13:12206997-12206859 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 14-149 |
| Cow position: | chr13:20839515-20839378 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 82 |
| Conread position: | 14-154 |
| Cow position: | chr13:9161872-9161727 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 14-154 |
| Cow position: | chr13:33974682-33974539 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 14-154 |
| Cow position: | chr13:52536511-52536364 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-156 |
| Cow position: | chr13:6540367-6540510 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 67 |
| Conread position: | 14-156 |
| Cow position: | chr13:8240612-8240469 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 93, 70 |
| Conread position: | 14-156 |
| Cow position: | chr13:10758076-10757931 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 26 |
| Conread position: | 14-156 |
| Cow position: | chr13:15143893-15144040 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr13:17089571-17089722 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 14-156 |
| Cow position: | chr13:21242135-21242285 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr13:36877009-36876856 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 14-156 |
| Cow position: | chr13:45108467-45108610 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 93, 72 |
| Conread position: | 14-156 |
| Cow position: | chr13:49457633-49457493 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 65 |
| Conread position: | 14-156 |
| Cow position: | chr13:55713487-55713634 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr13:57355991-57355848 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 93, 63 |
| Conread position: | 16-156 |
| Cow position: | chr13:13088976-13088823 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 17-154 |
| Cow position: | chr13:58422021-58421883 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 17-155 |
| Cow position: | chr13:23795442-23795587 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 70, 8 |
| Conread position: | 17-156 |
| Cow position: | chr13:10845550-10845409 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 18-155 |
| Cow position: | chr13:56431880-56432029 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 18-156 |
| Cow position: | chr13:20529522-20529661 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 20-147 |
| Cow position: | chr13:20864053-20864184 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 25-156 |
| Cow position: | chr13:16106352-16106212 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 33-156 |
| Cow position: | chr13:8312327-8312451 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 98 |
| Conread position: | 56-149 |
| Cow position: | chr13:37342453-37342548 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.