Cow genome map
| Conread name: | Fat1-C95008 |
| Conread position: | 1-85 |
| Cow position: | chr16:5257017-5257104 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-85 |
| Cow position: | chr16:11615224-11615137 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-93 |
| Cow position: | chr16:41697071-41696976 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-146 |
| Cow position: | chr16:11134960-11134799 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-149 |
| Cow position: | chr16:11660440-11660281 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-149 |
| Cow position: | chr16:31484641-31484477 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 1-155 |
| Cow position: | chr16:40514461-40514298 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-156 |
| Cow position: | chr16:8530862-8530702 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 1-156 |
| Cow position: | chr16:22207101-22207253 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 1-156 |
| Cow position: | chr16:41530279-41530112 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-156 |
| Cow position: | chr16:41807081-41806928 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 1-156 |
| Cow position: | chr16:51710116-51709953 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 1-156 |
| Cow position: | chr16:54226576-54226418 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-156 |
| Cow position: | chr16:56231848-56232008 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-148 |
| Cow position: | chr16:14125160-14125309 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 2-148 |
| Cow position: | chr16:17736264-17736416 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 2-154 |
| Cow position: | chr16:32893650-32893813 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 109 |
| Conread position: | 2-156 |
| Cow position: | chr16:25839642-25839807 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 5-130 |
| Cow position: | chr16:27659721-27659592 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-155 |
| Cow position: | chr16:40333296-40333140 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 82, 11 |
| Conread position: | 5-156 |
| Cow position: | chr16:7546801-7546640 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 6-156 |
| Cow position: | chr16:52834862-52834705 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 7-93 |
| Cow position: | chr16:5636614-5636700 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 75 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-144 |
| Cow position: | chr16:16570942-16571084 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 7-147 |
| Cow position: | chr16:10504854-10505001 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 7-156 |
| Cow position: | chr16:13290541-13290695 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-156 |
| Cow position: | chr16:37401279-37401435 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 9, 71 |
| Conread position: | 10-154 |
| Cow position: | chr16:56285654-56285500 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 10-156 |
| Cow position: | chr16:47518878-47519028 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 11-149 |
| Cow position: | chr16:36120949-36120807 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 12-148 |
| Cow position: | chr16:47773995-47774137 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 13-156 |
| Cow position: | chr16:50931489-50931337 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 14-131 |
| Cow position: | chr16:25484372-25484492 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 14-149 |
| Cow position: | chr16:10148319-10148456 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 14-154 |
| Cow position: | chr16:28396044-28395897 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-156 |
| Cow position: | chr16:4102794-4102646 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 14-156 |
| Cow position: | chr16:9727331-9727475 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 14-156 |
| Cow position: | chr16:11359188-11359343 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-156 |
| Cow position: | chr16:13990012-13990162 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-156 |
| Cow position: | chr16:15171358-15171222 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 14-156 |
| Cow position: | chr16:29655362-29655510 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr16:31079054-31078907 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 121 |
| Conread position: | 14-156 |
| Cow position: | chr16:45731350-45731209 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 47 |
| Conread position: | 14-156 |
| Cow position: | chr16:52275092-52274939 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 14-156 |
| Cow position: | chr16:54710002-54709857 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 15-149 |
| Cow position: | chr16:8025817-8025680 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 16-156 |
| Cow position: | chr16:51697124-51697271 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 21-155 |
| Cow position: | chr16:280634-280497 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 23-149 |
| Cow position: | chr16:51043698-51043835 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 26-148 |
| Cow position: | chr16:45676814-45676686 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 110 |
Show alignments to all cow chromosomes.