Cow genome map
| Conread name: | Fat1-C95008 |
| Conread position: | 1-147 |
| Cow position: | chr17:5423008-5422851 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-147 |
| Cow position: | chr17:44234311-44234472 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-149 |
| Cow position: | chr17:36864691-36864852 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-156 |
| Cow position: | chr17:9824730-9824903 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr17:12019484-12019323 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 80, 50 |
| Conread position: | 1-156 |
| Cow position: | chr17:12556633-12556786 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 106, 66 |
| Conread position: | 1-156 |
| Cow position: | chr17:33933684-33933512 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-85 |
| Cow position: | chr17:20392214-20392296 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 74 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-154 |
| Cow position: | chr17:5372465-5372298 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-155 |
| Cow position: | chr17:3182317-3182162 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 3-156 |
| Cow position: | chr17:12325702-12325534 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-85 |
| Cow position: | chr17:3388891-3388971 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 72 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-156 |
| Cow position: | chr17:21243722-21243573 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 127, 98 |
| Conread position: | 5-156 |
| Cow position: | chr17:24497220-24497375 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 52 |
| Conread position: | 5-156 |
| Cow position: | chr17:40406509-40406659 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 6-148 |
| Cow position: | chr17:35311599-35311747 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 6-156 |
| Cow position: | chr17:33288413-33288255 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-156 |
| Cow position: | chr17:1025759-1025598 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-156 |
| Cow position: | chr17:32471714-32471554 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 156 |
| Conread position: | 7-156 |
| Cow position: | chr17:33793233-33793388 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 127 |
| Conread position: | 10-156 |
| Cow position: | chr17:25612163-25612323 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 11-123 |
| Cow position: | chr17:30107972-30108086 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 11-156 |
| Cow position: | chr17:27429639-27429792 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 104 |
| Conread position: | 13-156 |
| Cow position: | chr17:42259291-42259437 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 74, 120 |
| Conread position: | 14-147 |
| Cow position: | chr17:12536388-12536247 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-149 |
| Cow position: | chr17:6101327-6101463 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 11 |
| Conread position: | 14-149 |
| Cow position: | chr17:39606507-39606651 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 125 |
| Conread position: | 14-154 |
| Cow position: | chr17:5000511-5000367 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 14-155 |
| Cow position: | chr17:23563719-23563577 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 14-155 |
| Cow position: | chr17:36957980-36958123 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 14-156 |
| Cow position: | chr17:1040822-1040964 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 90, 59 |
| Conread position: | 14-156 |
| Cow position: | chr17:1106009-1105869 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 14-156 |
| Cow position: | chr17:3353960-3354105 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 27 |
| Conread position: | 14-156 |
| Cow position: | chr17:6423841-6423990 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 14-156 |
| Cow position: | chr17:9932223-9932075 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 14-156 |
| Cow position: | chr17:12200870-12201028 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 14-156 |
| Cow position: | chr17:12342404-12342266 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 14-156 |
| Cow position: | chr17:13922560-13922718 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 14-156 |
| Cow position: | chr17:33275673-33275523 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 18-156 |
| Cow position: | chr17:39759199-39759344 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 54 |
| Conread position: | 24-156 |
| Cow position: | chr17:42675940-42675804 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 36-156 |
| Cow position: | chr17:17757142-17757021 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 71, 60 |
Show alignments to all cow chromosomes.