Cow genome map
| Conread name: | Fat1-C95008 |
| Conread position: | 1-84 |
| Cow position: | chr18:12242264-12242347 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 75 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-84 |
| Cow position: | chr18:49324446-49324363 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 75 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-103 |
| Cow position: | chr18:35889112-35889008 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-149 |
| Cow position: | chr18:29065396-29065237 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 1-154 |
| Cow position: | chr18:5711666-5711516 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 1-154 |
| Cow position: | chr18:10576098-10576263 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-155 |
| Cow position: | chr18:35367205-35367044 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 1-155 |
| Cow position: | chr18:43796968-43796798 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-156 |
| Cow position: | chr18:18844004-18844173 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-156 |
| Cow position: | chr18:31711577-31711415 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 1-156 |
| Cow position: | chr18:32243741-32243578 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 61 |
| Conread position: | 1-156 |
| Cow position: | chr18:44262620-44262785 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-156 |
| Cow position: | chr18:47183306-47183151 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 1-156 |
| Cow position: | chr18:47868595-47868758 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-156 |
| Cow position: | chr18:49981452-49981296 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 2-145 |
| Cow position: | chr18:43125074-43125228 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 2-154 |
| Cow position: | chr18:11578062-11578216 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 2-154 |
| Cow position: | chr18:15173004-15173164 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 85, 136 |
| Conread position: | 2-156 |
| Cow position: | chr18:8171097-8170929 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-156 |
| Cow position: | chr18:49100380-49100223 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 4-156 |
| Cow position: | chr18:52877352-52877510 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 15, 5 |
| Conread position: | 5-147 |
| Cow position: | chr18:2146588-2146439 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-148 |
| Cow position: | chr18:49017489-49017637 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 5-154 |
| Cow position: | chr18:23630613-23630455 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 5-155 |
| Cow position: | chr18:55038960-55039103 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 5-156 |
| Cow position: | chr18:2793980-2793814 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-156 |
| Cow position: | chr18:20126298-20126454 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-156 |
| Cow position: | chr18:21187297-21187461 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 6-86 |
| Cow position: | chr18:45903902-45903822 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 72 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-154 |
| Cow position: | chr18:33299896-33300045 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 7-149 |
| Cow position: | chr18:49015122-49015271 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 7-156 |
| Cow position: | chr18:15809807-15809649 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 7-156 |
| Cow position: | chr18:38806579-38806729 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 64 |
| Conread position: | 7-156 |
| Cow position: | chr18:48713544-48713704 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 9-148 |
| Cow position: | chr18:38228405-38228554 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 9-156 |
| Cow position: | chr18:50263925-50263768 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 78, 133 |
| Conread position: | 11-149 |
| Cow position: | chr18:18568993-18569133 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 13-156 |
| Cow position: | chr18:21143960-21143806 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 14-144 |
| Cow position: | chr18:11684985-11685107 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 93, 69 |
| Conread position: | 14-148 |
| Cow position: | chr18:25006490-25006352 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 14-154 |
| Cow position: | chr18:20462692-20462547 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 14-154 |
| Cow position: | chr18:30586222-30586076 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-154 |
| Cow position: | chr18:35582035-35581893 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 14-154 |
| Cow position: | chr18:47125397-47125252 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr18:6075392-6075246 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr18:9846407-9846257 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr18:18592476-18592626 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 14-156 |
| Cow position: | chr18:24719316-24719471 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-156 |
| Cow position: | chr18:50359335-50359487 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 14-156 |
| Cow position: | chr18:50637468-50637330 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 93, 30 |
| Conread position: | 16-148 |
| Cow position: | chr18:9596188-9596331 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 16-149 |
| Cow position: | chr18:49691619-49691758 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 16-156 |
| Cow position: | chr18:12056675-12056532 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 16-156 |
| Cow position: | chr18:38985704-38985853 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 19-156 |
| Cow position: | chr18:38017711-38017840 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 26-154 |
| Cow position: | chr18:29091753-29091888 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 27-155 |
| Cow position: | chr18:28189705-28189573 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.