Cow genome map
| Conread name: | Fat1-C95008 |
| Conread position: | 1-86 |
| Cow position: | chr21:42562714-42562799 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 74 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-149 |
| Cow position: | chr21:15911487-15911630 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 106, 91 |
| Conread position: | 1-149 |
| Cow position: | chr21:32559281-32559119 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-154 |
| Cow position: | chr21:12104449-12104610 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:674769-674927 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 1-156 |
| Cow position: | chr21:802233-802064 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:13883565-13883736 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 151 |
| Conread position: | 1-156 |
| Cow position: | chr21:20418598-20418447 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 79 |
| Conread position: | 1-156 |
| Cow position: | chr21:28030373-28030538 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 1-156 |
| Cow position: | chr21:44214211-44214370 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:46451870-46451713 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 111 |
| Conread position: | 2-144 |
| Cow position: | chr21:28211280-28211424 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 105, 33 |
| Conread position: | 2-156 |
| Cow position: | chr21:22851010-22851174 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 6 |
| Conread position: | 5-133 |
| Cow position: | chr21:48083138-48083011 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 5-149 |
| Cow position: | chr21:7673211-7673365 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 5-155 |
| Cow position: | chr21:34654161-34654328 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 5-156 |
| Cow position: | chr21:6851260-6851424 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 5-156 |
| Cow position: | chr21:9710640-9710493 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 128, 20 |
| Conread position: | 5-156 |
| Cow position: | chr21:30657958-30658120 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 6-156 |
| Cow position: | chr21:44861411-44861262 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 41 |
| Conread position: | 7-148 |
| Cow position: | chr21:31691575-31691723 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 133 |
| Conread position: | 7-156 |
| Cow position: | chr21:19868865-19868703 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-156 |
| Cow position: | chr21:24598749-24598902 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 127 |
| Conread position: | 7-156 |
| Cow position: | chr21:27229701-27229544 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 57 |
| Conread position: | 7-156 |
| Cow position: | chr21:30592219-30592055 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 7-156 |
| Cow position: | chr21:38121191-38121338 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 9-156 |
| Cow position: | chr21:12075065-12074919 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 54, 81 |
| Conread position: | 11-156 |
| Cow position: | chr21:2785396-2785242 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 11-156 |
| Cow position: | chr21:15544132-15543980 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 74, 128 |
| Conread position: | 11-156 |
| Cow position: | chr21:36817034-36817171 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 13-156 |
| Cow position: | chr21:25536224-25536360 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 61 |
| Conread position: | 14-149 |
| Cow position: | chr21:21158911-21159055 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr21:236005-236148 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 69, 117 |
| Conread position: | 14-156 |
| Cow position: | chr21:11678212-11678063 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr21:15012539-15012690 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 73, 125 |
| Conread position: | 14-156 |
| Cow position: | chr21:25014930-25014781 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 16 |
| Conread position: | 14-156 |
| Cow position: | chr21:30222445-30222601 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-156 |
| Cow position: | chr21:38900874-38901022 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 16-144 |
| Cow position: | chr21:36398461-36398321 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 30-156 |
| Cow position: | chr21:11298683-11298810 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 55 |
Show alignments to all cow chromosomes.