Cow genome map
| Conread name: | Fat1-C95008 |
| Conread position: | 1-147 |
| Cow position: | chr23:1403783-1403634 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 85 |
| Conread position: | 1-149 |
| Cow position: | chr23:13202335-13202180 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 1-154 |
| Cow position: | chr23:1429803-1429637 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-155 |
| Cow position: | chr23:22668482-22668315 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr23:1438315-1438476 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-156 |
| Cow position: | chr23:1680333-1680487 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 128 |
| Conread position: | 1-156 |
| Cow position: | chr23:1981636-1981475 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 82, 137 |
| Conread position: | 1-156 |
| Cow position: | chr23:5732574-5732735 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 14, 135 |
| Conread position: | 1-156 |
| Cow position: | chr23:16744570-16744741 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr23:16961320-16961484 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr23:18902029-18901868 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-156 |
| Cow position: | chr23:19872654-19872502 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 82, 16 |
| Conread position: | 1-156 |
| Cow position: | chr23:24509717-24509882 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-144 |
| Cow position: | chr23:24513903-24514048 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-155 |
| Cow position: | chr23:12363594-12363422 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-156 |
| Cow position: | chr23:5237396-5237241 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 18, 90 |
| Conread position: | 2-156 |
| Cow position: | chr23:39778425-39778595 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 5-155 |
| Cow position: | chr23:16881136-16880973 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-156 |
| Cow position: | chr23:17392649-17392805 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 82, 30 |
| Conread position: | 5-156 |
| Cow position: | chr23:23197373-23197524 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 82, 117 |
| Conread position: | 5-156 |
| Cow position: | chr23:24685271-24685438 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 73 |
| Conread position: | 5-156 |
| Cow position: | chr23:25968451-25968614 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 6-143 |
| Cow position: | chr23:35938373-35938514 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 134 |
| Conread position: | 6-149 |
| Cow position: | chr23:17484818-17484666 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 6-155 |
| Cow position: | chr23:1276881-1277040 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 6-156 |
| Cow position: | chr23:2457473-2457629 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 81, 107 |
| Conread position: | 7-156 |
| Cow position: | chr23:1490390-1490552 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 7-156 |
| Cow position: | chr23:1583555-1583715 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 7, 110 |
| Conread position: | 10-156 |
| Cow position: | chr23:6148002-6147855 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 55, 79 |
| Conread position: | 11-156 |
| Cow position: | chr23:5461303-5461163 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 96, 6 |
| Conread position: | 13-156 |
| Cow position: | chr23:25933195-25933346 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 14-145 |
| Cow position: | chr23:7361145-7361282 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 110 |
| Conread position: | 14-154 |
| Cow position: | chr23:22826402-22826257 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-156 |
| Cow position: | chr23:672638-672780 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 73 |
| Conread position: | 14-156 |
| Cow position: | chr23:5395437-5395285 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr23:7709829-7709980 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 63 |
| Conread position: | 14-156 |
| Cow position: | chr23:8063583-8063726 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 14-156 |
| Cow position: | chr23:17597465-17597620 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 14-156 |
| Cow position: | chr23:20388612-20388468 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-156 |
| Cow position: | chr23:20539424-20539577 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 14-156 |
| Cow position: | chr23:23904289-23904148 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 93, 69 |
| Conread position: | 14-156 |
| Cow position: | chr23:38732283-38732429 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 16-156 |
| Cow position: | chr23:22414263-22414111 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 21-156 |
| Cow position: | chr23:3917819-3917672 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 24-156 |
| Cow position: | chr23:31753299-31753431 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 83, 89 |
| Conread position: | 35-156 |
| Cow position: | chr23:18710399-18710274 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.