Cow genome map
| Conread name: | Fat1-C95008 |
| Conread position: | 1-85 |
| Cow position: | chr24:27349178-27349094 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 75 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-147 |
| Cow position: | chr24:18442563-18442410 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-148 |
| Cow position: | chr24:32095309-32095442 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-149 |
| Cow position: | chr24:6131873-6131723 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 82, 131 |
| Conread position: | 1-149 |
| Cow position: | chr24:35675535-35675695 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-154 |
| Cow position: | chr24:15246647-15246489 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 128 |
| Conread position: | 1-154 |
| Cow position: | chr24:21834963-21834794 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-154 |
| Cow position: | chr24:23694909-23694742 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 145 |
| Conread position: | 1-156 |
| Cow position: | chr24:13610307-13610472 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-156 |
| Cow position: | chr24:15057395-15057555 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 24 |
| Conread position: | 1-156 |
| Cow position: | chr24:20364414-20364245 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr24:24491021-24490855 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 1-156 |
| Cow position: | chr24:27844532-27844362 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr24:30897540-30897391 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 1-156 |
| Cow position: | chr24:37037896-37038062 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr24:42687844-42688012 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 2-150 |
| Cow position: | chr24:29561576-29561414 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-154 |
| Cow position: | chr24:5360716-5360880 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 2-156 |
| Cow position: | chr24:39226994-39227144 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 84 |
| Conread position: | 5-145 |
| Cow position: | chr24:41755865-41756010 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-149 |
| Cow position: | chr24:25122344-25122501 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 5-156 |
| Cow position: | chr24:1269786-1269948 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 5-156 |
| Cow position: | chr24:27713405-27713239 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-156 |
| Cow position: | chr24:39849886-39849721 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 7-156 |
| Cow position: | chr24:30235875-30236043 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 7-156 |
| Cow position: | chr24:33372557-33372717 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 11-156 |
| Cow position: | chr24:24755456-24755600 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 124 |
| Conread position: | 14-148 |
| Cow position: | chr24:38841410-38841270 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-149 |
| Cow position: | chr24:41934958-41935092 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 93, 55 |
| Conread position: | 14-154 |
| Cow position: | chr24:33244407-33244555 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 121 |
| Conread position: | 14-155 |
| Cow position: | chr24:28344397-28344550 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 98 |
| Conread position: | 14-156 |
| Cow position: | chr24:175480-175337 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 14-156 |
| Cow position: | chr24:6723779-6723924 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 14-156 |
| Cow position: | chr24:13353051-13353197 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 14-156 |
| Cow position: | chr24:16509989-16510142 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 71, 137 |
| Conread position: | 14-156 |
| Cow position: | chr24:23000025-23000172 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 63, 98 |
| Conread position: | 14-156 |
| Cow position: | chr24:29984972-29984819 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr24:37945617-37945475 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 15-148 |
| Cow position: | chr24:27824475-27824599 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 15-148 |
| Cow position: | chr24:39483489-39483626 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 15-156 |
| Cow position: | chr24:39304567-39304427 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 16-149 |
| Cow position: | chr24:15414945-15414810 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 17-156 |
| Cow position: | chr24:43352180-43352321 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 24-117 |
| Cow position: | chr24:29180939-29181035 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 24-156 |
| Cow position: | chr24:13114777-13114913 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 63, 95 |
| Conread position: | 29-156 |
| Cow position: | chr24:17938719-17938852 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 34-156 |
| Cow position: | chr24:2223180-2223050 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 35-156 |
| Cow position: | chr24:28303322-28303191 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.