Cow genome map
| Conread name: | Fat1-C95008 |
| Conread position: | 1-85 |
| Cow position: | chr25:6683044-6682957 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-144 |
| Cow position: | chr25:17190726-17190573 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-149 |
| Cow position: | chr25:13621338-13621176 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-156 |
| Cow position: | chr25:4681249-4681398 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 63 |
| Conread position: | 1-156 |
| Cow position: | chr25:7216844-7217009 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 161 |
| Conread position: | 1-156 |
| Cow position: | chr25:11436789-11436631 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 1-156 |
| Cow position: | chr25:14720762-14720925 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr25:18929174-18929013 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr25:21191507-21191670 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 106 |
| Conread position: | 1-156 |
| Cow position: | chr25:22178935-22179103 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-156 |
| Cow position: | chr25:23998906-23998746 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-156 |
| Cow position: | chr25:27916033-27916194 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 2-156 |
| Cow position: | chr25:12778519-12778368 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 105, 86 |
| Conread position: | 2-156 |
| Cow position: | chr25:17975359-17975206 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 5-143 |
| Cow position: | chr25:9107502-9107353 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 136 |
| Conread position: | 5-145 |
| Cow position: | chr25:11661796-11661648 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 133 |
| Conread position: | 5-148 |
| Cow position: | chr25:32453394-32453245 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 5-154 |
| Cow position: | chr25:16319118-16318959 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-155 |
| Cow position: | chr25:3205515-3205664 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 72 |
| Conread position: | 5-155 |
| Cow position: | chr25:12509989-12509829 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-156 |
| Cow position: | chr25:10156594-10156746 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 5-156 |
| Cow position: | chr25:18810365-18810524 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 5-156 |
| Cow position: | chr25:31926355-31926191 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 6-147 |
| Cow position: | chr25:11780301-11780448 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 10 |
| Conread position: | 7-126 |
| Cow position: | chr25:32277583-32277451 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 7-156 |
| Cow position: | chr25:2361861-2362018 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 7-156 |
| Cow position: | chr25:11760426-11760267 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 8-154 |
| Cow position: | chr25:11823405-11823253 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 14-154 |
| Cow position: | chr25:12223605-12223755 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-154 |
| Cow position: | chr25:26089779-26089636 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-156 |
| Cow position: | chr25:2111079-2111229 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 14-156 |
| Cow position: | chr25:10364300-10364161 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 14-156 |
| Cow position: | chr25:14210017-14210169 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr25:20063308-20063453 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 14-156 |
| Cow position: | chr25:20202947-20203100 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 73, 149 |
| Conread position: | 14-156 |
| Cow position: | chr25:24147912-24147763 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 14-156 |
| Cow position: | chr25:24669410-24669259 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 14-156 |
| Cow position: | chr25:30462274-30462128 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 14-156 |
| Cow position: | chr25:36081909-36082061 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr25:36340985-36340849 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 16-148 |
| Cow position: | chr25:20023350-20023209 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 16-156 |
| Cow position: | chr25:18721084-18720935 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 70, 145 |
| Conread position: | 20-156 |
| Cow position: | chr25:17707864-17707998 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 44 |
| Conread position: | 24-156 |
| Cow position: | chr25:13565279-13565141 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 29-156 |
| Cow position: | chr25:4504725-4504587 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 30-149 |
| Cow position: | chr25:7450125-7450245 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 37-156 |
| Cow position: | chr25:5341691-5341810 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 51 |
Show alignments to all cow chromosomes.