Cow genome map
| Conread name: | Fat1-C95008 |
| Conread position: | 1-85 |
| Cow position: | chr28:2151415-2151328 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-149 |
| Cow position: | chr28:1099639-1099484 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-149 |
| Cow position: | chr28:4006809-4006974 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-154 |
| Cow position: | chr28:3143850-3143687 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-154 |
| Cow position: | chr28:5235906-5236072 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-155 |
| Cow position: | chr28:4866542-4866379 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 1-156 |
| Cow position: | chr28:3746227-3746397 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-156 |
| Cow position: | chr28:6975266-6975434 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-156 |
| Cow position: | chr28:8396360-8396525 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 126 |
| Conread position: | 1-156 |
| Cow position: | chr28:10890710-10890542 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr28:11816641-11816484 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 21, 129 |
| Conread position: | 1-156 |
| Cow position: | chr28:12991167-12991335 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-156 |
| Cow position: | chr28:13267818-13267969 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 15 |
| Conread position: | 1-156 |
| Cow position: | chr28:19216847-19217012 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-156 |
| Cow position: | chr28:29850790-29850622 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-149 |
| Cow position: | chr28:8513461-8513315 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 2-156 |
| Cow position: | chr28:30327062-30326901 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 4-156 |
| Cow position: | chr28:5254903-5255071 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 5-85 |
| Cow position: | chr28:9705682-9705762 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 72 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-155 |
| Cow position: | chr28:9740495-9740657 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-156 |
| Cow position: | chr28:2762224-2762372 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 5-156 |
| Cow position: | chr28:7132058-7131891 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 5-156 |
| Cow position: | chr28:9109245-9109411 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 5-156 |
| Cow position: | chr28:29416687-29416525 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 6-154 |
| Cow position: | chr28:5204225-5204383 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 136 |
| Conread position: | 6-156 |
| Cow position: | chr28:19564198-19564035 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 6-156 |
| Cow position: | chr28:26719373-26719530 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-85 |
| Cow position: | chr28:3264077-3264155 (view UCSC Genome Browser custom track) |
| Alignm length: | 79 |
| Alignm identity: | 71 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-154 |
| Cow position: | chr28:5138960-5138801 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 7-156 |
| Cow position: | chr28:5205302-5205451 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 10-154 |
| Cow position: | chr28:26574447-26574598 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 106 |
| Conread position: | 10-156 |
| Cow position: | chr28:17728065-17727912 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 13-156 |
| Cow position: | chr28:22500458-22500306 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 27 |
| Conread position: | 14-147 |
| Cow position: | chr28:10964460-10964597 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 14-148 |
| Cow position: | chr28:3914758-3914897 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-149 |
| Cow position: | chr28:26372778-26372914 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 93, 73 |
| Conread position: | 14-155 |
| Cow position: | chr28:10203160-10203311 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 14-156 |
| Cow position: | chr28:3023872-3023716 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 14-156 |
| Cow position: | chr28:3410946-3410789 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 14-156 |
| Cow position: | chr28:8304288-8304442 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr28:8681389-8681237 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr28:10588980-10588833 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 73, 50 |
| Conread position: | 14-156 |
| Cow position: | chr28:10762935-10763088 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 14-156 |
| Cow position: | chr28:11426500-11426348 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 14-156 |
| Cow position: | chr28:16370042-16369889 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr28:16767555-16767409 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 14-156 |
| Cow position: | chr28:21207327-21207177 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 14-156 |
| Cow position: | chr28:22813299-22813448 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 14-156 |
| Cow position: | chr28:24996572-24996418 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 14-156 |
| Cow position: | chr28:26614914-26615053 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 14-156 |
| Cow position: | chr28:26784200-26784056 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 48 |
| Conread position: | 15-156 |
| Cow position: | chr28:11859508-11859371 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 16-156 |
| Cow position: | chr28:13269770-13269918 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 24-156 |
| Cow position: | chr28:2737467-2737327 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 24-156 |
| Cow position: | chr28:22371615-22371475 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 24-156 |
| Cow position: | chr28:24238426-24238284 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 31-155 |
| Cow position: | chr28:10891258-10891127 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.