Cow genome map
| Conread name: | Fat1-C95008 |
| Conread position: | 1-85 |
| Cow position: | chr6:28900386-28900473 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 78 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-96 |
| Cow position: | chr6:31078808-31078711 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 1-99 |
| Cow position: | chr6:60266123-60266022 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-144 |
| Cow position: | chr6:34119293-34119140 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-146 |
| Cow position: | chr6:45690550-45690393 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 147 |
| Conread position: | 1-149 |
| Cow position: | chr6:53024744-53024583 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-154 |
| Cow position: | chr6:59603148-59602982 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-155 |
| Cow position: | chr6:47574966-47575125 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-155 |
| Cow position: | chr6:49398560-49398395 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-155 |
| Cow position: | chr6:51933614-51933773 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 82, 61 |
| Conread position: | 1-156 |
| Cow position: | chr6:16090963-16091132 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:23532717-23532881 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 1-156 |
| Cow position: | chr6:29210555-29210712 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 1-156 |
| Cow position: | chr6:32121967-32122130 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:41226770-41226612 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 86, 132 |
| Conread position: | 1-156 |
| Cow position: | chr6:66570500-66570660 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 2-85 |
| Cow position: | chr6:54471868-54471785 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 73 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-156 |
| Cow position: | chr6:24031440-24031598 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 3-85 |
| Cow position: | chr6:26915393-26915475 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 74 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-145 |
| Cow position: | chr6:28999873-28999733 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 5-149 |
| Cow position: | chr6:58173413-58173570 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-149 |
| Cow position: | chr6:69145423-69145569 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 5-156 |
| Cow position: | chr6:19259278-19259123 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 5-156 |
| Cow position: | chr6:31535505-31535338 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-156 |
| Cow position: | chr6:43651816-43651959 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 6-146 |
| Cow position: | chr6:37466155-37466302 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 6-155 |
| Cow position: | chr6:30825701-30825543 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 79, 147 |
| Conread position: | 6-156 |
| Cow position: | chr6:15300764-15300605 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 10 |
| Conread position: | 6-156 |
| Cow position: | chr6:37994273-37994439 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-149 |
| Cow position: | chr6:106449-106307 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 81 |
| Conread position: | 7-156 |
| Cow position: | chr6:8966163-8966323 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 7-156 |
| Cow position: | chr6:49421723-49421561 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 77, 135 |
| Conread position: | 7-156 |
| Cow position: | chr6:62965827-62965684 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 99, 9 |
| Conread position: | 9-156 |
| Cow position: | chr6:43540182-43540027 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 11-156 |
| Cow position: | chr6:47884957-47884810 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 12-148 |
| Cow position: | chr6:23594018-23594162 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 13-148 |
| Cow position: | chr6:17090674-17090808 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 14-145 |
| Cow position: | chr6:63720276-63720416 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-149 |
| Cow position: | chr6:38771356-38771499 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-152 |
| Cow position: | chr6:9008536-9008395 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 14-154 |
| Cow position: | chr6:7119543-7119397 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-156 |
| Cow position: | chr6:37463098-37463240 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 69 |
| Conread position: | 14-156 |
| Cow position: | chr6:59265625-59265478 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 15-156 |
| Cow position: | chr6:47173951-47173802 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 16-149 |
| Cow position: | chr6:23938138-23938279 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 16-154 |
| Cow position: | chr6:7291393-7291544 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 16-156 |
| Cow position: | chr6:4323407-4323557 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 21-155 |
| Cow position: | chr6:36493169-36493040 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 71, 80 |
| Conread position: | 29-156 |
| Cow position: | chr6:67615062-67614931 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 36-156 |
| Cow position: | chr6:47486839-47486954 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 96, 50 |
Show alignments to all cow chromosomes.