Cow genome map
| Conread name: | Fat1-PT5E8 |
| Conread position: | 1-138 |
| Cow position: | chr12:22859484-22859613 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-142 |
| Cow position: | chr12:14396764-14396625 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 57 |
| Conread position: | 1-146 |
| Cow position: | chr12:2708064-2707921 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 1-147 |
| Cow position: | chr12:45782247-45782394 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 60 |
| Conread position: | 5-152 |
| Cow position: | chr12:35136943-35137099 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 78 |
| Conread position: | 6-106 |
| Cow position: | chr12:3623720-3623818 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 6-107 |
| Cow position: | chr12:11106555-11106450 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 6-132 |
| Cow position: | chr12:40157999-40157871 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 6-133 |
| Cow position: | chr12:3057113-3057247 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 6-138 |
| Cow position: | chr12:24639660-24639791 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 43 |
| Conread position: | 6-138 |
| Cow position: | chr12:25299385-25299524 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-139 |
| Cow position: | chr12:11056902-11057030 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 6-141 |
| Cow position: | chr12:22047947-22048089 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-142 |
| Cow position: | chr12:31602796-31602655 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 6-142 |
| Cow position: | chr12:35770995-35770858 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 6-142 |
| Cow position: | chr12:43974315-43974459 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 77 |
| Conread position: | 6-144 |
| Cow position: | chr12:35469421-35469282 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 103, 35 |
| Conread position: | 6-145 |
| Cow position: | chr12:9129934-9130073 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 52 |
| Conread position: | 6-145 |
| Cow position: | chr12:11587800-11587939 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 6-145 |
| Cow position: | chr12:32808587-32808447 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 102, 52 |
| Conread position: | 6-145 |
| Cow position: | chr12:40910259-40910114 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 74, 34 |
| Conread position: | 6-145 |
| Cow position: | chr12:42561927-42562067 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 6-145 |
| Cow position: | chr12:42967021-42967165 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 6-146 |
| Cow position: | chr12:20356783-20356640 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-146 |
| Cow position: | chr12:38774217-38774074 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 6-147 |
| Cow position: | chr12:13988395-13988545 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 6-147 |
| Cow position: | chr12:18103586-18103446 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 6-147 |
| Cow position: | chr12:27563351-27563208 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 6-147 |
| Cow position: | chr12:35368668-35368815 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 6-149 |
| Cow position: | chr12:16628966-16628823 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 135, 75 |
| Conread position: | 6-152 |
| Cow position: | chr12:3454720-3454871 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 46, 143 |
| Conread position: | 6-152 |
| Cow position: | chr12:4719973-4720120 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 101, 52 |
| Conread position: | 6-152 |
| Cow position: | chr12:5344103-5343951 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 6-152 |
| Cow position: | chr12:11272800-11272652 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 6-152 |
| Cow position: | chr12:12699615-12699460 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 6-152 |
| Cow position: | chr12:14223007-14223159 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 135 |
| Conread position: | 6-152 |
| Cow position: | chr12:22323248-22323091 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 55, 146 |
| Conread position: | 6-152 |
| Cow position: | chr12:35310660-35310505 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 6-152 |
| Cow position: | chr12:37123676-37123829 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 6-152 |
| Cow position: | chr12:38032114-38031967 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 6-152 |
| Cow position: | chr12:39150026-39149873 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 6-153 |
| Cow position: | chr12:39320414-39320566 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 6-156 |
| Cow position: | chr12:8481817-8481666 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 6-158 |
| Cow position: | chr12:26868788-26868629 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 6-160 |
| Cow position: | chr12:31269180-31269341 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 7-140 |
| Cow position: | chr12:4954854-4954986 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 7-145 |
| Cow position: | chr12:9055392-9055246 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 7-147 |
| Cow position: | chr12:16386430-16386285 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 7-152 |
| Cow position: | chr12:25280475-25280327 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 7-152 |
| Cow position: | chr12:26749925-26749776 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 8-138 |
| Cow position: | chr12:43619308-43619446 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 8-147 |
| Cow position: | chr12:22752653-22752803 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 144 |
| Conread position: | 8-149 |
| Cow position: | chr12:37742326-37742474 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 8-152 |
| Cow position: | chr12:37718743-37718591 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 8-161 |
| Cow position: | chr12:24397136-24396976 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 10-143 |
| Cow position: | chr12:39431603-39431736 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 10-145 |
| Cow position: | chr12:19258306-19258446 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 12-145 |
| Cow position: | chr12:6719419-6719560 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 71 |
Show alignments to all cow chromosomes.