Cow genome map
| Conread name: | Fat1-PT5E8 |
| Conread position: | 1-138 |
| Cow position: | chr16:36286624-36286485 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 70 |
| Conread position: | 1-142 |
| Cow position: | chr16:16935458-16935318 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 1-144 |
| Cow position: | chr16:12102594-12102741 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 53, 83 |
| Conread position: | 1-145 |
| Cow position: | chr16:23088905-23089050 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 110, 5 |
| Conread position: | 1-145 |
| Cow position: | chr16:46548209-46548053 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-146 |
| Cow position: | chr16:8522330-8522181 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 1-146 |
| Cow position: | chr16:50282372-50282225 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-147 |
| Cow position: | chr16:48385343-48385206 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-152 |
| Cow position: | chr16:20743254-20743100 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 76 |
| Conread position: | 1-152 |
| Cow position: | chr16:43758586-43758432 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 1-157 |
| Cow position: | chr16:31558961-31559122 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 1-163 |
| Cow position: | chr16:22984813-22984977 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 60 |
| Conread position: | 5-147 |
| Cow position: | chr16:7665701-7665850 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 78 |
| Conread position: | 5-149 |
| Cow position: | chr16:30581056-30580906 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 6-126 |
| Cow position: | chr16:14568424-14568301 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 51 |
| Conread position: | 6-130 |
| Cow position: | chr16:29037980-29038111 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 6-137 |
| Cow position: | chr16:7928320-7928181 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-138 |
| Cow position: | chr16:26550976-26550838 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 6-138 |
| Cow position: | chr16:44138428-44138288 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 6-138 |
| Cow position: | chr16:51216981-51216843 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 59, 75 |
| Conread position: | 6-139 |
| Cow position: | chr16:7152107-7151970 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 6-140 |
| Cow position: | chr16:8065823-8065681 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 6-140 |
| Cow position: | chr16:42253336-42253202 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 6-141 |
| Cow position: | chr16:589651-589522 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 6-143 |
| Cow position: | chr16:27327060-27326915 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 46, 77 |
| Conread position: | 6-143 |
| Cow position: | chr16:30646577-30646715 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 101, 57 |
| Conread position: | 6-143 |
| Cow position: | chr16:42733946-42733814 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 6-144 |
| Cow position: | chr16:10032927-10033073 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 6-144 |
| Cow position: | chr16:19756712-19756572 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 6-144 |
| Cow position: | chr16:29311588-29311735 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 6-145 |
| Cow position: | chr16:7496321-7496458 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 6-145 |
| Cow position: | chr16:15370751-15370893 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 103, 44 |
| Conread position: | 6-145 |
| Cow position: | chr16:16968637-16968499 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 6-145 |
| Cow position: | chr16:18206024-18206164 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 6-145 |
| Cow position: | chr16:23053888-23054035 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 6-145 |
| Cow position: | chr16:31493114-31493258 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 6-146 |
| Cow position: | chr16:23955767-23955621 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 6-146 |
| Cow position: | chr16:30908882-30908739 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 6-147 |
| Cow position: | chr16:25419189-25419041 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 52 |
| Conread position: | 6-147 |
| Cow position: | chr16:50078694-50078546 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 6-147 |
| Cow position: | chr16:56912623-56912476 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 59, 48 |
| Conread position: | 6-148 |
| Cow position: | chr16:40029819-40029672 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 6-149 |
| Cow position: | chr16:9615153-9615001 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 6-149 |
| Cow position: | chr16:28233240-28233093 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 6-149 |
| Cow position: | chr16:38251071-38251208 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 47 |
| Conread position: | 6-150 |
| Cow position: | chr16:9097088-9097237 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-151 |
| Cow position: | chr16:15714174-15714325 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 6-152 |
| Cow position: | chr16:9126875-9127020 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 6-152 |
| Cow position: | chr16:12220746-12220901 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 6-152 |
| Cow position: | chr16:14343644-14343789 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 6-152 |
| Cow position: | chr16:16232121-16232273 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 6-152 |
| Cow position: | chr16:42107694-42107844 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 6-152 |
| Cow position: | chr16:45943701-45943550 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 6-152 |
| Cow position: | chr16:47662793-47662941 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 6-155 |
| Cow position: | chr16:52325534-52325373 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 6-162 |
| Cow position: | chr16:56082300-56082131 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 43, 77 |
| Conread position: | 7-138 |
| Cow position: | chr16:28444424-28444286 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 7-139 |
| Cow position: | chr16:11359217-11359350 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 102, 47 |
| Conread position: | 7-145 |
| Cow position: | chr16:56595324-56595180 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 46, 76 |
| Conread position: | 7-146 |
| Cow position: | chr16:28199094-28199240 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 55 |
| Conread position: | 7-162 |
| Cow position: | chr16:4911380-4911222 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 8-145 |
| Cow position: | chr16:44144455-44144600 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 8-152 |
| Cow position: | chr16:7583464-7583614 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 8-152 |
| Cow position: | chr16:44428950-44429092 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 58 |
| Conread position: | 8-153 |
| Cow position: | chr16:33290451-33290603 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 9-138 |
| Cow position: | chr16:14210713-14210580 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 9-147 |
| Cow position: | chr16:9596438-9596573 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 9-147 |
| Cow position: | chr16:38663643-38663497 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 10-143 |
| Cow position: | chr16:9578423-9578287 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 10-144 |
| Cow position: | chr16:11957509-11957372 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 11-145 |
| Cow position: | chr16:33073816-33073678 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 11-147 |
| Cow position: | chr16:18243802-18243947 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 11-148 |
| Cow position: | chr16:30368756-30368613 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 11-152 |
| Cow position: | chr16:17180230-17180376 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 12-145 |
| Cow position: | chr16:13996125-13995987 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 13-138 |
| Cow position: | chr16:11083069-11083198 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 15-144 |
| Cow position: | chr16:258212-258075 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 16-145 |
| Cow position: | chr16:39646688-39646819 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 19-145 |
| Cow position: | chr16:15957403-15957270 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 64 |
Show alignments to all cow chromosomes.