Cow genome map
| Conread name: | Fat1-PT5E8 |
| Conread position: | 1-132 |
| Cow position: | chr17:5344717-5344855 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-138 |
| Cow position: | chr17:24841795-24841939 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 1-152 |
| Cow position: | chr17:10037507-10037670 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 1-152 |
| Cow position: | chr17:24077501-24077642 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-152 |
| Cow position: | chr17:26072661-26072503 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 82 |
| Conread position: | 1-162 |
| Cow position: | chr17:15355031-15355205 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 5-137 |
| Cow position: | chr17:20913213-20913349 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 5-147 |
| Cow position: | chr17:9509892-9509742 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 60, 78 |
| Conread position: | 5-152 |
| Cow position: | chr17:25467086-25467239 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 6-130 |
| Cow position: | chr17:24862563-24862689 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 6-139 |
| Cow position: | chr17:1783517-1783383 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 101, 31 |
| Conread position: | 6-140 |
| Cow position: | chr17:7571208-7571350 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 47, 77 |
| Conread position: | 6-140 |
| Cow position: | chr17:26183449-26183592 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 6-143 |
| Cow position: | chr17:10820880-10820741 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 6-143 |
| Cow position: | chr17:12887464-12887599 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 6-143 |
| Cow position: | chr17:17222445-17222590 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 45, 78 |
| Conread position: | 6-145 |
| Cow position: | chr17:6761743-6761606 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 29 |
| Conread position: | 6-145 |
| Cow position: | chr17:6787041-6787189 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 6-145 |
| Cow position: | chr17:7803070-7802923 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 6-145 |
| Cow position: | chr17:12946247-12946112 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 6-145 |
| Cow position: | chr17:15684615-15684752 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 6-145 |
| Cow position: | chr17:15883776-15883924 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 6-145 |
| Cow position: | chr17:18673935-18673788 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-145 |
| Cow position: | chr17:20157712-20157856 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 75 |
| Conread position: | 6-145 |
| Cow position: | chr17:27795759-27795904 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 6-145 |
| Cow position: | chr17:30169126-30168988 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 6-145 |
| Cow position: | chr17:36814466-36814614 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-145 |
| Cow position: | chr17:42419814-42419954 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 6-146 |
| Cow position: | chr17:3387822-3387969 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 6-147 |
| Cow position: | chr17:25584346-25584494 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-149 |
| Cow position: | chr17:11921060-11920910 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-151 |
| Cow position: | chr17:10414603-10414744 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 6-151 |
| Cow position: | chr17:21181556-21181708 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 6-152 |
| Cow position: | chr17:1469480-1469621 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 103, 52 |
| Conread position: | 6-152 |
| Cow position: | chr17:11618689-11618843 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 6-152 |
| Cow position: | chr17:18720342-18720199 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 6-152 |
| Cow position: | chr17:20884628-20884780 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 6-152 |
| Cow position: | chr17:21959583-21959428 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 6-153 |
| Cow position: | chr17:1463226-1463069 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-153 |
| Cow position: | chr17:35935264-35935416 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 7-152 |
| Cow position: | chr17:19471665-19471517 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 57 |
| Conread position: | 7-153 |
| Cow position: | chr17:22128028-22128177 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 68, 55 |
| Conread position: | 8-136 |
| Cow position: | chr17:32978826-32978697 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 8-137 |
| Cow position: | chr17:41380405-41380276 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 44, 54 |
| Conread position: | 8-149 |
| Cow position: | chr17:25702708-25702857 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 8-152 |
| Cow position: | chr17:25875502-25875651 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 58 |
| Conread position: | 8-152 |
| Cow position: | chr17:44108055-44107914 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 8-153 |
| Cow position: | chr17:12289302-12289155 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 9-147 |
| Cow position: | chr17:36178936-36178800 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 9-157 |
| Cow position: | chr17:33271557-33271408 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 100, 49 |
| Conread position: | 10-146 |
| Cow position: | chr17:21718888-21718745 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 41, 70 |
| Conread position: | 11-150 |
| Cow position: | chr17:11056055-11055914 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 12-152 |
| Cow position: | chr17:21236633-21236780 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 53, 71 |
| Conread position: | 18-147 |
| Cow position: | chr17:4271246-4271109 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 66 |
Show alignments to all cow chromosomes.