Cow genome map
| Conread name: | Fat1-PT5E8 |
| Conread position: | 1-107 |
| Cow position: | chr18:42427646-42427749 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-136 |
| Cow position: | chr18:21782713-21782851 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 1-138 |
| Cow position: | chr18:19765215-19765354 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 1-140 |
| Cow position: | chr18:16659406-16659258 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 1-144 |
| Cow position: | chr18:17195319-17195172 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 81 |
| Conread position: | 1-145 |
| Cow position: | chr18:21751404-21751557 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 1-145 |
| Cow position: | chr18:29945558-29945709 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 1-146 |
| Cow position: | chr18:7956174-7956325 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 5-138 |
| Cow position: | chr18:29080837-29080961 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 5-152 |
| Cow position: | chr18:49126988-49126841 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 104, 58 |
| Conread position: | 5-161 |
| Cow position: | chr18:11867370-11867532 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 60, 49 |
| Conread position: | 6-106 |
| Cow position: | chr18:23821801-23821697 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-107 |
| Cow position: | chr18:12273689-12273787 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 6-107 |
| Cow position: | chr18:24022649-24022748 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 6-107 |
| Cow position: | chr18:31727613-31727512 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 6-107 |
| Cow position: | chr18:35874109-35874211 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 6-130 |
| Cow position: | chr18:48112936-48112805 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 75 |
| Conread position: | 6-136 |
| Cow position: | chr18:35235992-35235854 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 6-137 |
| Cow position: | chr18:31672482-31672351 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 6-138 |
| Cow position: | chr18:45897696-45897565 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 102, 52 |
| Conread position: | 6-139 |
| Cow position: | chr18:34490312-34490450 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 6-140 |
| Cow position: | chr18:37690181-37690320 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 6-140 |
| Cow position: | chr18:49038493-49038622 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 6-142 |
| Cow position: | chr18:23810089-23809950 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-142 |
| Cow position: | chr18:32253479-32253335 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 6-142 |
| Cow position: | chr18:38211187-38211330 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-142 |
| Cow position: | chr18:49970622-49970480 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 6-143 |
| Cow position: | chr18:14871574-14871432 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 75 |
| Conread position: | 6-144 |
| Cow position: | chr18:8208394-8208250 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 136 |
| Conread position: | 6-144 |
| Cow position: | chr18:23898449-23898586 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 6-144 |
| Cow position: | chr18:31557129-31556985 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-145 |
| Cow position: | chr18:32023-32165 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 53, 80 |
| Conread position: | 6-145 |
| Cow position: | chr18:10051778-10051921 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 6-145 |
| Cow position: | chr18:10214159-10214012 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 6-145 |
| Cow position: | chr18:18844047-18844188 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 101, 55 |
| Conread position: | 6-145 |
| Cow position: | chr18:26355014-26354867 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 6-145 |
| Cow position: | chr18:36098397-36098532 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 102, 48 |
| Conread position: | 6-145 |
| Cow position: | chr18:36296711-36296572 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 6-145 |
| Cow position: | chr18:39460251-39460391 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 6-145 |
| Cow position: | chr18:50359363-50359500 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 6-147 |
| Cow position: | chr18:3180442-3180589 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 6-147 |
| Cow position: | chr18:7487263-7487411 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 6-147 |
| Cow position: | chr18:12584808-12584668 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 6-147 |
| Cow position: | chr18:22240146-22240005 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 6-147 |
| Cow position: | chr18:34389352-34389204 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 6-147 |
| Cow position: | chr18:40047469-40047327 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 32 |
| Conread position: | 6-149 |
| Cow position: | chr18:14172180-14172034 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 101, 72 |
| Conread position: | 6-151 |
| Cow position: | chr18:39662810-39662962 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 6-152 |
| Cow position: | chr18:3211909-3212063 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 6-152 |
| Cow position: | chr18:4718290-4718444 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 6-152 |
| Cow position: | chr18:4857693-4857540 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 6-152 |
| Cow position: | chr18:16313410-16313558 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 101, 56 |
| Conread position: | 6-152 |
| Cow position: | chr18:22045383-22045229 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 6-152 |
| Cow position: | chr18:23447030-23446885 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 6-152 |
| Cow position: | chr18:24946118-24946261 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 6-152 |
| Cow position: | chr18:44909084-44909235 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 6-153 |
| Cow position: | chr18:44206053-44205911 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 6-155 |
| Cow position: | chr18:6005468-6005319 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 39 |
| Conread position: | 6-160 |
| Cow position: | chr18:33492391-33492534 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 6-161 |
| Cow position: | chr18:22120854-22120695 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 6-162 |
| Cow position: | chr18:23648953-23649116 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 7-138 |
| Cow position: | chr18:4851451-4851317 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 72 |
| Conread position: | 7-145 |
| Cow position: | chr18:45185904-45186043 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 7-146 |
| Cow position: | chr18:44514118-44514266 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 7-152 |
| Cow position: | chr18:24266375-24266221 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 7-154 |
| Cow position: | chr18:5632300-5632448 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 8-107 |
| Cow position: | chr18:24759623-24759526 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 8-142 |
| Cow position: | chr18:23380164-23380299 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 8-144 |
| Cow position: | chr18:27637525-27637666 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 53, 75 |
| Conread position: | 8-152 |
| Cow position: | chr18:52251824-52251672 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 8-152 |
| Cow position: | chr18:52382937-52383091 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 9-145 |
| Cow position: | chr18:21528684-21528825 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 9-145 |
| Cow position: | chr18:49281029-49280888 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 73 |
| Conread position: | 10-145 |
| Cow position: | chr18:2144606-2144744 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 73 |
| Conread position: | 10-161 |
| Cow position: | chr18:35857889-35857734 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 11-138 |
| Cow position: | chr18:51405875-51405749 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 98, 50 |
| Conread position: | 11-152 |
| Cow position: | chr18:47417033-47417183 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 13-143 |
| Cow position: | chr18:51757131-51757267 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 13-162 |
| Cow position: | chr18:43950866-43951020 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 56 |
Show alignments to all cow chromosomes.