Cow genome map
| Conread name: | Fat1-PT5E8 |
| Conread position: | 1-145 |
| Cow position: | chr21:37706292-37706140 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 1-146 |
| Cow position: | chr21:42227574-42227424 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 1-159 |
| Cow position: | chr21:957795-957954 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 5-143 |
| Cow position: | chr21:3763616-3763482 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 104, 46 |
| Conread position: | 5-147 |
| Cow position: | chr21:40475625-40475774 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 49, 78 |
| Conread position: | 6-125 |
| Cow position: | chr21:17193621-17193496 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 62 |
| Conread position: | 6-131 |
| Cow position: | chr21:16152569-16152698 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 6-132 |
| Cow position: | chr21:15444957-15444823 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-136 |
| Cow position: | chr21:17890430-17890566 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 75 |
| Conread position: | 6-136 |
| Cow position: | chr21:23568356-23568488 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 101, 55 |
| Conread position: | 6-138 |
| Cow position: | chr21:29418696-29418837 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 138 |
| Conread position: | 6-138 |
| Cow position: | chr21:34738706-34738836 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 6-142 |
| Cow position: | chr21:1464471-1464611 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 6-142 |
| Cow position: | chr21:48482402-48482261 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 6-143 |
| Cow position: | chr21:10004758-10004614 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 6-143 |
| Cow position: | chr21:37928777-37928921 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 56 |
| Conread position: | 6-144 |
| Cow position: | chr21:3135741-3135597 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 56 |
| Conread position: | 6-144 |
| Cow position: | chr21:15271309-15271168 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 6-144 |
| Cow position: | chr21:45971046-45970908 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 103, 52 |
| Conread position: | 6-145 |
| Cow position: | chr21:745303-745442 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 6-145 |
| Cow position: | chr21:5218837-5218978 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 6-145 |
| Cow position: | chr21:13134728-13134867 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 6-145 |
| Cow position: | chr21:16099437-16099289 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 6-145 |
| Cow position: | chr21:28882309-28882455 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 6-146 |
| Cow position: | chr21:34209888-34209742 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-147 |
| Cow position: | chr21:5345006-5345155 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 77 |
| Conread position: | 6-147 |
| Cow position: | chr21:7535418-7535277 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 77 |
| Conread position: | 6-147 |
| Cow position: | chr21:26828846-26828698 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 6-147 |
| Cow position: | chr21:27521212-27521069 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 6-149 |
| Cow position: | chr21:11779414-11779263 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 68, 143 |
| Conread position: | 6-150 |
| Cow position: | chr21:21907306-21907165 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 6-151 |
| Cow position: | chr21:32536524-32536666 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 52 |
| Conread position: | 6-151 |
| Cow position: | chr21:46612669-46612526 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 6-152 |
| Cow position: | chr21:18568511-18568359 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 6-152 |
| Cow position: | chr21:27409604-27409460 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 6-152 |
| Cow position: | chr21:30938538-30938387 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 6-152 |
| Cow position: | chr21:39319282-39319132 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 6-155 |
| Cow position: | chr21:44251715-44251560 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 59, 141 |
| Conread position: | 6-158 |
| Cow position: | chr21:12473933-12473779 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 6-160 |
| Cow position: | chr21:8430972-8430810 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 6-161 |
| Cow position: | chr21:31659023-31658869 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 101, 52 |
| Conread position: | 7-113 |
| Cow position: | chr21:6736060-6735957 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 7-140 |
| Cow position: | chr21:42189627-42189494 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 100, 50 |
| Conread position: | 7-143 |
| Cow position: | chr21:24757069-24757207 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 100, 55 |
| Conread position: | 7-145 |
| Cow position: | chr21:4108904-4109047 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 7-145 |
| Cow position: | chr21:16796980-16797122 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 7-151 |
| Cow position: | chr21:3379623-3379478 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 90, 71 |
| Conread position: | 7-160 |
| Cow position: | chr21:27863384-27863230 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 102, 31 |
| Conread position: | 8-137 |
| Cow position: | chr21:28244600-28244731 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 101, 53 |
| Conread position: | 8-149 |
| Cow position: | chr21:3177977-3178122 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 8-149 |
| Cow position: | chr21:40266251-40266400 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 71, 57 |
| Conread position: | 9-144 |
| Cow position: | chr21:15869821-15869957 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 100, 53 |
| Conread position: | 9-160 |
| Cow position: | chr21:30359216-30359064 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 98, 52 |
| Conread position: | 10-124 |
| Cow position: | chr21:31258598-31258720 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 10-154 |
| Cow position: | chr21:36763193-36763342 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 10-155 |
| Cow position: | chr21:40821763-40821610 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 10-161 |
| Cow position: | chr21:6051635-6051792 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 11-138 |
| Cow position: | chr21:44724240-44724111 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 51 |
| Conread position: | 11-152 |
| Cow position: | chr21:28919395-28919253 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 47 |
| Conread position: | 12-147 |
| Cow position: | chr21:38482513-38482655 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 136 |
| Conread position: | 21-145 |
| Cow position: | chr21:12293164-12293296 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 62 |
| Conread position: | 24-152 |
| Cow position: | chr21:31278331-31278466 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 62 |
Show alignments to all cow chromosomes.