Cow genome map
| Conread name: | Fat1-PT5E8 |
| Conread position: | 1-140 |
| Cow position: | chr27:11208657-11208804 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 1-152 |
| Cow position: | chr27:15865504-15865353 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 106, 61 |
| Conread position: | 6-107 |
| Cow position: | chr27:26909699-26909798 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 6-137 |
| Cow position: | chr27:11349172-11349041 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 45 |
| Conread position: | 6-138 |
| Cow position: | chr27:9977575-9977441 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 53 |
| Conread position: | 6-138 |
| Cow position: | chr27:11145771-11145637 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 6-138 |
| Cow position: | chr27:18882544-18882412 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 100, 35 |
| Conread position: | 6-140 |
| Cow position: | chr27:21054352-21054211 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-140 |
| Cow position: | chr27:28931909-28932049 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 6-142 |
| Cow position: | chr27:2036612-2036478 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 103, 52 |
| Conread position: | 6-143 |
| Cow position: | chr27:11982753-11982897 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-143 |
| Cow position: | chr27:13940665-13940800 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 6-143 |
| Cow position: | chr27:20266333-20266475 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-143 |
| Cow position: | chr27:26481301-26481446 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 137 |
| Conread position: | 6-144 |
| Cow position: | chr27:20048526-20048386 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 58 |
| Conread position: | 6-144 |
| Cow position: | chr27:27020205-27020346 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 75 |
| Conread position: | 6-144 |
| Cow position: | chr27:30914902-30914756 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 6-145 |
| Cow position: | chr27:2592434-2592285 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 6-145 |
| Cow position: | chr27:5553362-5553220 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-145 |
| Cow position: | chr27:15315411-15315271 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 6-146 |
| Cow position: | chr27:9504448-9504300 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 6-146 |
| Cow position: | chr27:21101398-21101545 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 6-146 |
| Cow position: | chr27:31386739-31386883 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 6-147 |
| Cow position: | chr27:24303839-24303690 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 52, 143 |
| Conread position: | 6-147 |
| Cow position: | chr27:26400829-26400970 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 57 |
| Conread position: | 6-149 |
| Cow position: | chr27:18558253-18558103 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 137 |
| Conread position: | 6-152 |
| Cow position: | chr27:19992041-19991893 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 133 |
| Conread position: | 6-152 |
| Cow position: | chr27:20514715-20514566 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-152 |
| Cow position: | chr27:22792724-22792580 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 6-152 |
| Cow position: | chr27:26121652-26121500 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 76 |
| Conread position: | 6-152 |
| Cow position: | chr27:26317958-26317810 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-152 |
| Cow position: | chr27:29246255-29246401 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 6-153 |
| Cow position: | chr27:15867282-15867135 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 101, 57 |
| Conread position: | 6-153 |
| Cow position: | chr27:20749118-20749262 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 6-161 |
| Cow position: | chr27:16965469-16965307 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-140 |
| Cow position: | chr27:27012590-27012449 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 7-145 |
| Cow position: | chr27:18873939-18873801 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 104, 55 |
| Conread position: | 7-147 |
| Cow position: | chr27:26437230-26437373 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 59 |
| Conread position: | 7-152 |
| Cow position: | chr27:7935266-7935413 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 7-152 |
| Cow position: | chr27:18867923-18868062 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-152 |
| Cow position: | chr27:23760090-23760237 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 7-160 |
| Cow position: | chr27:31373078-31373239 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 8-138 |
| Cow position: | chr27:26118390-26118252 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 8-147 |
| Cow position: | chr27:4413929-4414067 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 8-149 |
| Cow position: | chr27:27648427-27648571 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 9-145 |
| Cow position: | chr27:19779766-19779625 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 10-141 |
| Cow position: | chr27:21419302-21419430 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 48 |
| Conread position: | 10-145 |
| Cow position: | chr27:18791623-18791765 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 11-139 |
| Cow position: | chr27:20354489-20354354 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 11-145 |
| Cow position: | chr27:26236218-26236080 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 14-151 |
| Cow position: | chr27:28896765-28896622 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 14-152 |
| Cow position: | chr27:29458216-29458071 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 68 |
Show alignments to all cow chromosomes.