Cow genome map
| Conread name: | Fat1-PT5E8 |
| Conread position: | 1-138 |
| Cow position: | chr28:12951481-12951622 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 78 |
| Conread position: | 1-139 |
| Cow position: | chr28:11815012-11814872 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 108, 60 |
| Conread position: | 1-143 |
| Cow position: | chr28:4881176-4881038 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-144 |
| Cow position: | chr28:5817906-5818050 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 105, 76 |
| Conread position: | 1-145 |
| Cow position: | chr28:16200679-16200527 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 1-146 |
| Cow position: | chr28:6283427-6283277 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 1-149 |
| Cow position: | chr28:11562182-11562027 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 1-155 |
| Cow position: | chr28:10297915-10298061 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 6-132 |
| Cow position: | chr28:16857038-16856906 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 6-133 |
| Cow position: | chr28:4185975-4186104 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 101, 56 |
| Conread position: | 6-133 |
| Cow position: | chr28:21263226-21263355 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 101, 55 |
| Conread position: | 6-138 |
| Cow position: | chr28:3423846-3423983 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 6-142 |
| Cow position: | chr28:11411465-11411328 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 6-143 |
| Cow position: | chr28:5673944-5674083 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 57 |
| Conread position: | 6-144 |
| Cow position: | chr28:4022742-4022883 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 6-144 |
| Cow position: | chr28:6301150-6301296 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 6-144 |
| Cow position: | chr28:10053256-10053122 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 103, 52 |
| Conread position: | 6-144 |
| Cow position: | chr28:11866596-11866456 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 6-144 |
| Cow position: | chr28:15411749-15411892 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 72 |
| Conread position: | 6-144 |
| Cow position: | chr28:20281827-20281960 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 7 |
| Conread position: | 6-144 |
| Cow position: | chr28:22278563-22278412 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 6-145 |
| Cow position: | chr28:3311155-3311008 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 6-145 |
| Cow position: | chr28:5428685-5428547 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 101, 55 |
| Conread position: | 6-145 |
| Cow position: | chr28:10958871-10959011 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 6-146 |
| Cow position: | chr28:2524011-2524156 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-146 |
| Cow position: | chr28:16252336-16252194 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 103, 5 |
| Conread position: | 6-147 |
| Cow position: | chr28:2892321-2892470 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 6-147 |
| Cow position: | chr28:4163514-4163366 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 6-147 |
| Cow position: | chr28:5630167-5630313 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 8 |
| Conread position: | 6-147 |
| Cow position: | chr28:25700796-25700656 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 55 |
| Conread position: | 6-150 |
| Cow position: | chr28:9426281-9426134 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 6-152 |
| Cow position: | chr28:2077569-2077720 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 78 |
| Conread position: | 6-152 |
| Cow position: | chr28:10495232-10495081 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 69, 56 |
| Conread position: | 6-152 |
| Cow position: | chr28:11346418-11346268 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 72 |
| Conread position: | 6-152 |
| Cow position: | chr28:13245630-13245784 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 6-152 |
| Cow position: | chr28:13448192-13448335 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 6-152 |
| Cow position: | chr28:15362648-15362801 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 6-152 |
| Cow position: | chr28:21008597-21008447 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 105, 44 |
| Conread position: | 6-152 |
| Cow position: | chr28:32014853-32015004 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 6-153 |
| Cow position: | chr28:7350723-7350866 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 6-153 |
| Cow position: | chr28:33322528-33322673 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 6-161 |
| Cow position: | chr28:6563828-6563664 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 7-144 |
| Cow position: | chr28:3726139-3725996 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 7-144 |
| Cow position: | chr28:28765833-28765693 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 7-146 |
| Cow position: | chr28:10606564-10606426 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 101, 54 |
| Conread position: | 8-132 |
| Cow position: | chr28:5188356-5188229 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 99, 54 |
| Conread position: | 8-135 |
| Cow position: | chr28:12933659-12933533 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 53 |
| Conread position: | 8-145 |
| Cow position: | chr28:10615875-10615738 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 8-148 |
| Cow position: | chr28:22132981-22133124 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 66 |
| Conread position: | 9-147 |
| Cow position: | chr28:751297-751445 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 9-152 |
| Cow position: | chr28:4307825-4307674 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 9-153 |
| Cow position: | chr28:11398725-11398573 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 10-140 |
| Cow position: | chr28:4282418-4282282 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 10-144 |
| Cow position: | chr28:17739895-17740039 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 10-145 |
| Cow position: | chr28:5294929-5294789 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 10-145 |
| Cow position: | chr28:8165143-8165000 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 10-146 |
| Cow position: | chr28:13356298-13356153 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 10-147 |
| Cow position: | chr28:117690-117543 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 10-150 |
| Cow position: | chr28:3011197-3011049 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 10-151 |
| Cow position: | chr28:118682-118833 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 12-145 |
| Cow position: | chr28:19394943-19395076 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 12-152 |
| Cow position: | chr28:16159796-16159651 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 13-147 |
| Cow position: | chr28:17620286-17620144 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 13-153 |
| Cow position: | chr28:5232014-5232164 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 55 |
| Conread position: | 17-148 |
| Cow position: | chr28:9100006-9100144 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 24-147 |
| Cow position: | chr28:3449399-3449523 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 38 |
Show alignments to all cow chromosomes.