Cow genome map

Conread name: Fat1-PT5E8

Conread position: 1-140
Cow position: chr6:47989524-47989668 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 62

Conread position: 1-144
Cow position: chr6:67574486-67574635 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 82

Conread position: 1-147
Cow position: chr6:16016132-16016284 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 40

Conread position: 1-147
Cow position: chr6:46274031-46273884 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 11

Conread position: 1-147
Cow position: chr6:67187783-67187927 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 61

Conread position: 1-147
Cow position: chr6:67211825-67211677 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 5

Conread position: 1-152
Cow position: chr6:24110380-24110538 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 86

Conread position: 1-152
Cow position: chr6:40833916-40833766 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 110, 61

Conread position: 1-156
Cow position: chr6:6117546-6117391 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 106, 60

Conread position: 2-152
Cow position: chr6:49685916-49686074 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 135
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 6, 69

Conread position: 5-140
Cow position: chr6:57935471-57935334 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 75

Conread position: 5-142
Cow position: chr6:58697529-58697384 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 57

Conread position: 5-153
Cow position: chr6:7539675-7539829 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 65

Conread position: 5-158
Cow position: chr6:43906581-43906422 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 78

Conread position: 6-107
Cow position: chr6:15058480-15058581 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 55

Conread position: 6-107
Cow position: chr6:30895888-30895784 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 63

Conread position: 6-125
Cow position: chr6:27219271-27219394 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 73

Conread position: 6-126
Cow position: chr6:2585046-2585170 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 73

Conread position: 6-136
Cow position: chr6:7801293-7801161 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 76

Conread position: 6-136
Cow position: chr6:16627838-16627968 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 45

Conread position: 6-136
Cow position: chr6:35985033-35984895 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 77

Conread position: 6-137
Cow position: chr6:48278785-48278656 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 57

Conread position: 6-138
Cow position: chr6:37149293-37149423 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 103, 57

Conread position: 6-138
Cow position: chr6:44544045-44543906 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 76

Conread position: 6-138
Cow position: chr6:57467700-57467840 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 75

Conread position: 6-139
Cow position: chr6:57546125-57545987 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 77

Conread position: 6-143
Cow position: chr6:12099583-12099445 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 48

Conread position: 6-143
Cow position: chr6:21004780-21004924 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 78

Conread position: 6-143
Cow position: chr6:47958915-47959049 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 61

Conread position: 6-144
Cow position: chr6:12964956-12965101 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 79

Conread position: 6-144
Cow position: chr6:14152787-14152644 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 95

Conread position: 6-144
Cow position: chr6:18152496-18152635 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 73

Conread position: 6-144
Cow position: chr6:45159954-45159809 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 75

Conread position: 6-145
Cow position: chr6:5330516-5330660 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 29

Conread position: 6-145
Cow position: chr6:15937751-15937604 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 76

Conread position: 6-145
Cow position: chr6:16137667-16137520 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 77

Conread position: 6-145
Cow position: chr6:21052346-21052199 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 65

Conread position: 6-145
Cow position: chr6:34076270-34076411 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 103, 58

Conread position: 6-145
Cow position: chr6:51530084-51529942 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 55

Conread position: 6-145
Cow position: chr6:57089307-57089452 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 75

Conread position: 6-145
Cow position: chr6:58304518-58304660 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 75

Conread position: 6-145
Cow position: chr6:62539499-62539360 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 101, 56

Conread position: 6-145
Cow position: chr6:66293588-66293730 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 77

Conread position: 6-146
Cow position: chr6:5095438-5095293 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 77

Conread position: 6-146
Cow position: chr6:33302498-33302644 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 76

Conread position: 6-146
Cow position: chr6:64432042-64432180 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 103, 55

Conread position: 6-147
Cow position: chr6:8562824-8562964 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 13

Conread position: 6-147
Cow position: chr6:31928740-31928888 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 77

Conread position: 6-147
Cow position: chr6:48435934-48436079 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 35

Conread position: 6-147
Cow position: chr6:62224525-62224670 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 78

Conread position: 6-149
Cow position: chr6:8468769-8468911 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 56

Conread position: 6-149
Cow position: chr6:18447414-18447263 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 77

Conread position: 6-149
Cow position: chr6:62079026-62079171 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 103, 72

Conread position: 6-149
Cow position: chr6:66259833-66259988 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 88

Conread position: 6-151
Cow position: chr6:13367389-13367536 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 103, 56

Conread position: 6-152
Cow position: chr6:15587491-15587337 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 77

Conread position: 6-152
Cow position: chr6:20219672-20219524 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 8, 40

Conread position: 6-152
Cow position: chr6:22876827-22876674 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 128
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 52, 77

Conread position: 6-152
Cow position: chr6:23381565-23381411 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 77

Conread position: 6-152
Cow position: chr6:31847137-31846992 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 55

Conread position: 6-152
Cow position: chr6:32126159-32126308 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 101, 56

Conread position: 6-152
Cow position: chr6:35181153-35181000 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 142

Conread position: 6-152
Cow position: chr6:40032294-40032434 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 126
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 6-152
Cow position: chr6:53932743-53932590 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 56, 39

Conread position: 6-152
Cow position: chr6:55548430-55548280 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 74

Conread position: 6-152
Cow position: chr6:66947718-66947566 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 76

Conread position: 6-155
Cow position: chr6:24491139-24491288 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 73

Conread position: 6-155
Cow position: chr6:29496096-29496249 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 77

Conread position: 6-157
Cow position: chr6:16502942-16502782 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 6-160
Cow position: chr6:65264442-65264290 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 48

Conread position: 6-161
Cow position: chr6:10176198-10176034 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 55

Conread position: 6-161
Cow position: chr6:62371077-62370926 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 55

Conread position: 6-162
Cow position: chr6:67281998-67282148 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 138, 58

Conread position: 7-138
Cow position: chr6:19045727-19045869 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 79

Conread position: 7-145
Cow position: chr6:8688742-8688604 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 100, 56

Conread position: 7-145
Cow position: chr6:50771258-50771113 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 65

Conread position: 8-140
Cow position: chr6:19225278-19225150 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 101, 30

Conread position: 8-143
Cow position: chr6:54840402-54840254 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 8-147
Cow position: chr6:27888457-27888592 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 8-152
Cow position: chr6:11246873-11247023 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 33

Conread position: 8-155
Cow position: chr6:18440372-18440220 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 9-142
Cow position: chr6:67810878-67810743 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 53

Conread position: 9-147
Cow position: chr6:16411717-16411862 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 74

Conread position: 9-149
Cow position: chr6:4760098-4760245 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 73

Conread position: 9-149
Cow position: chr6:43345335-43345188 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 76

Conread position: 10-139
Cow position: chr6:21475835-21475967 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 28

Conread position: 10-140
Cow position: chr6:19695914-19696047 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 73

Conread position: 10-152
Cow position: chr6:66590182-66590325 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 101, 44

Conread position: 10-160
Cow position: chr6:19446358-19446514 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 53, 138

Conread position: 12-152
Cow position: chr6:53138830-53138683 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 73

Conread position: 12-158
Cow position: chr6:55417418-55417273 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 97, 50

Conread position: 13-152
Cow position: chr6:21184114-21183969 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 69

Conread position: 23-152
Cow position: chr6:456831-456695 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 60

Conread position: 25-152
Cow position: chr6:59569609-59569742 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 122

Show alignments to all cow chromosomes.