Cow genome map

Conread name: Fat1-PT5E8

Conread position: 1-145
Cow position: chr9:3946178-3946326 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 36

Conread position: 1-145
Cow position: chr9:51609245-51609100 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 50

Conread position: 1-149
Cow position: chr9:35932844-35932997 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 69

Conread position: 1-152
Cow position: chr9:17027167-17027012 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 66

Conread position: 5-107
Cow position: chr9:20637340-20637238 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 77

Conread position: 5-152
Cow position: chr9:44527084-44526924 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 149

Conread position: 5-160
Cow position: chr9:26715222-26715062 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 44

Conread position: 6-112
Cow position: chr9:35360324-35360434 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 77

Conread position: 6-133
Cow position: chr9:54598638-54598506 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 77

Conread position: 6-138
Cow position: chr9:5342282-5342418 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 73

Conread position: 6-140
Cow position: chr9:12495182-12495040 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 77

Conread position: 6-140
Cow position: chr9:16826230-16826376 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 6-141
Cow position: chr9:34917220-34917352 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 99, 50

Conread position: 6-142
Cow position: chr9:19657011-19657149 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 45, 75

Conread position: 6-142
Cow position: chr9:25375770-25375909 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 38

Conread position: 6-142
Cow position: chr9:32669982-32670121 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 77

Conread position: 6-142
Cow position: chr9:34196158-34196019 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 75

Conread position: 6-142
Cow position: chr9:44709794-44709658 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 60

Conread position: 6-142
Cow position: chr9:52763795-52763929 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 43

Conread position: 6-143
Cow position: chr9:5110823-5110679 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 76

Conread position: 6-143
Cow position: chr9:38624659-38624801 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 77

Conread position: 6-143
Cow position: chr9:40215212-40215071 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 77

Conread position: 6-143
Cow position: chr9:61019397-61019541 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 77

Conread position: 6-144
Cow position: chr9:2397772-2397632 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 52

Conread position: 6-144
Cow position: chr9:13743965-13744112 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 78

Conread position: 6-144
Cow position: chr9:17769283-17769145 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 58

Conread position: 6-144
Cow position: chr9:35295655-35295517 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 48

Conread position: 6-144
Cow position: chr9:59586276-59586137 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 43

Conread position: 6-145
Cow position: chr9:12786508-12786656 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 80

Conread position: 6-145
Cow position: chr9:20322128-20322270 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 72

Conread position: 6-145
Cow position: chr9:25583795-25583652 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 76

Conread position: 6-145
Cow position: chr9:31344642-31344789 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 77

Conread position: 6-145
Cow position: chr9:34423586-34423441 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 77

Conread position: 6-145
Cow position: chr9:35028200-35028346 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 63

Conread position: 6-145
Cow position: chr9:35832654-35832793 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 39

Conread position: 6-145
Cow position: chr9:50977288-50977435 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 77

Conread position: 6-147
Cow position: chr9:15215722-15215869 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 64

Conread position: 6-147
Cow position: chr9:20828871-20828724 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 77

Conread position: 6-147
Cow position: chr9:26057465-26057610 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 52, 74

Conread position: 6-147
Cow position: chr9:35049445-35049300 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 73

Conread position: 6-147
Cow position: chr9:40221221-40221364 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 72

Conread position: 6-147
Cow position: chr9:45170416-45170566 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 64

Conread position: 6-149
Cow position: chr9:1878037-1878178 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 57

Conread position: 6-151
Cow position: chr9:46981262-46981408 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 52

Conread position: 6-152
Cow position: chr9:2985036-2984884 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 75

Conread position: 6-152
Cow position: chr9:7543298-7543442 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 55

Conread position: 6-152
Cow position: chr9:7611826-7611972 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 103, 56

Conread position: 6-152
Cow position: chr9:8901262-8901414 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 39, 62

Conread position: 6-152
Cow position: chr9:9091140-9091293 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 80

Conread position: 6-152
Cow position: chr9:12280936-12280788 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 72

Conread position: 6-152
Cow position: chr9:13993730-13993577 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 6-152
Cow position: chr9:16115643-16115790 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 56

Conread position: 6-152
Cow position: chr9:20755791-20755945 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 56

Conread position: 6-152
Cow position: chr9:34760399-34760550 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 76

Conread position: 6-152
Cow position: chr9:41644785-41644938 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 80

Conread position: 6-152
Cow position: chr9:42062064-42061908 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 83

Conread position: 6-152
Cow position: chr9:52511084-52510929 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 77

Conread position: 6-152
Cow position: chr9:60741219-60741368 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 59, 22

Conread position: 6-152
Cow position: chr9:63185730-63185883 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 76

Conread position: 6-158
Cow position: chr9:58440410-58440574 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 79

Conread position: 6-159
Cow position: chr9:7409728-7409583 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 54

Conread position: 6-160
Cow position: chr9:36457964-36457803 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 64

Conread position: 6-161
Cow position: chr9:38941467-38941629 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 77

Conread position: 6-161
Cow position: chr9:54639853-54640012 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 73

Conread position: 7-145
Cow position: chr9:11123519-11123658 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 54

Conread position: 7-146
Cow position: chr9:28718676-28718537 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 55

Conread position: 7-149
Cow position: chr9:50310796-50310947 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 58, 47

Conread position: 7-152
Cow position: chr9:20394351-20394499 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 55

Conread position: 7-152
Cow position: chr9:31626098-31625945 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 76

Conread position: 7-152
Cow position: chr9:34286763-34286610 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 74

Conread position: 8-142
Cow position: chr9:34410433-34410568 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 94, 50

Conread position: 8-142
Cow position: chr9:63784951-63785085 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 101, 50

Conread position: 8-145
Cow position: chr9:8645229-8645087 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 75

Conread position: 8-146
Cow position: chr9:44822361-44822502 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 70

Conread position: 8-147
Cow position: chr9:6839956-6839817 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 74

Conread position: 8-147
Cow position: chr9:26477179-26477032 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 76

Conread position: 8-152
Cow position: chr9:16216942-16216791 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 59

Conread position: 8-152
Cow position: chr9:27307919-27308059 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 27

Conread position: 8-152
Cow position: chr9:35466559-35466707 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 79

Conread position: 8-153
Cow position: chr9:27279272-27279119 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 75

Conread position: 8-158
Cow position: chr9:51566532-51566689 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 75

Conread position: 9-149
Cow position: chr9:52484953-52485096 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 53

Conread position: 9-152
Cow position: chr9:7805743-7805598 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 53

Conread position: 9-157
Cow position: chr9:8468021-8467866 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 74

Conread position: 10-124
Cow position: chr9:41964773-41964890 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 69

Conread position: 10-145
Cow position: chr9:14738210-14738074 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 48

Conread position: 11-145
Cow position: chr9:52130975-52130833 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 72

Conread position: 12-148
Cow position: chr9:9311817-9311677 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 70

Conread position: 13-147
Cow position: chr9:56065522-56065382 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 70

Conread position: 17-105
Cow position: chr9:47310078-47310165 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 41, 46

Conread position: 20-151
Cow position: chr9:34986486-34986612 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 59

Conread position: 26-147
Cow position: chr9:60138740-60138617 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 57

Conread position: 64-152
Cow position: chr9:22071199-22071288 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 19

Show alignments to all cow chromosomes.