Cow genome map

Conread name: Fat1-PT5E8

Conread position: 1-139
Cow position: chrX:9367402-9367549 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 83

Conread position: 1-144
Cow position: chrX:17929087-17929233 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 65, 78

Conread position: 1-144
Cow position: chrX:42331371-42331510 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 5

Conread position: 1-145
Cow position: chrX:21327999-21328151 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 82

Conread position: 1-147
Cow position: chrX:8759707-8759862 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 86

Conread position: 1-147
Cow position: chrX:17498408-17498561 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 81

Conread position: 1-147
Cow position: chrX:27705672-27705825 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 82

Conread position: 1-152
Cow position: chrX:27431832-27431680 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 66, 81

Conread position: 1-155
Cow position: chrX:40336996-40337154 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 82

Conread position: 1-161
Cow position: chrX:35285259-35285427 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 82

Conread position: 3-142
Cow position: chrX:16801178-16801034 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 80

Conread position: 5-147
Cow position: chrX:42247092-42246942 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 78

Conread position: 6-105
Cow position: chrX:32318397-32318494 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 6-133
Cow position: chrX:22552888-22552754 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 77

Conread position: 6-133
Cow position: chrX:33678382-33678245 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 79

Conread position: 6-135
Cow position: chrX:19761845-19761976 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 56

Conread position: 6-135
Cow position: chrX:29478814-29478949 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 54, 73

Conread position: 6-135
Cow position: chrX:35681658-35681795 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 74

Conread position: 6-136
Cow position: chrX:41010989-41011118 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 103, 50

Conread position: 6-138
Cow position: chrX:17956781-17956918 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 62

Conread position: 6-138
Cow position: chrX:27415489-27415357 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 48

Conread position: 6-138
Cow position: chrX:42836272-42836406 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 76

Conread position: 6-139
Cow position: chrX:38094429-38094295 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 48

Conread position: 6-140
Cow position: chrX:41027250-41027392 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 75

Conread position: 6-141
Cow position: chrX:38218805-38218946 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 75

Conread position: 6-142
Cow position: chrX:1960334-1960191 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 56

Conread position: 6-143
Cow position: chrX:1938105-1938248 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 79

Conread position: 6-143
Cow position: chrX:3494956-3494815 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 76

Conread position: 6-143
Cow position: chrX:4268973-4268836 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 43

Conread position: 6-143
Cow position: chrX:13177385-13177250 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 57

Conread position: 6-143
Cow position: chrX:20887550-20887414 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 60

Conread position: 6-143
Cow position: chrX:26881989-26881844 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 77

Conread position: 6-143
Cow position: chrX:37867344-37867489 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 77

Conread position: 6-143
Cow position: chrX:40680705-40680850 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 77

Conread position: 6-143
Cow position: chrX:41790338-41790193 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 76

Conread position: 6-143
Cow position: chrX:42449923-42449778 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 77

Conread position: 6-143
Cow position: chrX:44123346-44123485 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 103, 55

Conread position: 6-144
Cow position: chrX:2314528-2314382 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 76

Conread position: 6-144
Cow position: chrX:6407634-6407780 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 80

Conread position: 6-144
Cow position: chrX:19356554-19356700 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 77

Conread position: 6-144
Cow position: chrX:27175089-27175236 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 55

Conread position: 6-144
Cow position: chrX:35885636-35885497 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 56

Conread position: 6-144
Cow position: chrX:46587913-46588056 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 73

Conread position: 6-144
Cow position: chrX:46793655-46793514 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 68, 58

Conread position: 6-145
Cow position: chrX:4399210-4399355 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 39

Conread position: 6-145
Cow position: chrX:11589276-11589131 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 135

Conread position: 6-145
Cow position: chrX:27668867-27668725 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 71

Conread position: 6-145
Cow position: chrX:33466715-33466859 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 6-145
Cow position: chrX:35409843-35409988 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 11

Conread position: 6-145
Cow position: chrX:38964199-38964332 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 103, 52

Conread position: 6-145
Cow position: chrX:41941714-41941860 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 77

Conread position: 6-146
Cow position: chrX:11602394-11602249 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 6-146
Cow position: chrX:25035291-25035144 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 76

Conread position: 6-146
Cow position: chrX:26720591-26720450 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 52

Conread position: 6-146
Cow position: chrX:37717812-37717961 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 77

Conread position: 6-146
Cow position: chrX:42875303-42875445 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 73

Conread position: 6-147
Cow position: chrX:20583757-20583901 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 71

Conread position: 6-147
Cow position: chrX:35509588-35509441 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 75

Conread position: 6-148
Cow position: chrX:24170638-24170486 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 5

Conread position: 6-148
Cow position: chrX:32330261-32330411 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 75

Conread position: 6-149
Cow position: chrX:35268952-35269096 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 56

Conread position: 6-149
Cow position: chrX:37752015-37751870 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 61

Conread position: 6-151
Cow position: chrX:42506858-42506704 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 79

Conread position: 6-152
Cow position: chrX:51810-51660 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 75

Conread position: 6-152
Cow position: chrX:11670777-11670930 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 48, 80

Conread position: 6-152
Cow position: chrX:12290810-12290961 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 61

Conread position: 6-152
Cow position: chrX:14925363-14925519 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 75

Conread position: 6-152
Cow position: chrX:15545973-15546124 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 45, 63

Conread position: 6-152
Cow position: chrX:17231826-17231980 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 81

Conread position: 6-152
Cow position: chrX:32877284-32877133 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 75

Conread position: 6-152
Cow position: chrX:35276076-35276229 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 80

Conread position: 6-152
Cow position: chrX:41435458-41435299 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 143

Conread position: 6-152
Cow position: chrX:44040267-44040419 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 77

Conread position: 6-152
Cow position: chrX:46909906-46910051 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 56

Conread position: 6-154
Cow position: chrX:1996361-1996202 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 77

Conread position: 6-155
Cow position: chrX:27270466-27270617 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 57

Conread position: 6-155
Cow position: chrX:43028323-43028476 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 73

Conread position: 6-159
Cow position: chrX:46532404-46532238 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 81

Conread position: 6-161
Cow position: chrX:3806773-3806927 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 58

Conread position: 6-161
Cow position: chrX:32747823-32747974 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 103, 56

Conread position: 7-140
Cow position: chrX:27261284-27261421 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 74

Conread position: 7-151
Cow position: chrX:33654752-33654600 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 76

Conread position: 7-152
Cow position: chrX:15147105-15146950 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 7-152
Cow position: chrX:19717612-19717755 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 39

Conread position: 7-152
Cow position: chrX:20345542-20345695 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 7-153
Cow position: chrX:16763833-16763685 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 102, 51

Conread position: 8-145
Cow position: chrX:4092017-4092159 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 75

Conread position: 8-145
Cow position: chrX:8642137-8642282 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 75

Conread position: 8-145
Cow position: chrX:41199320-41199459 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 53

Conread position: 8-146
Cow position: chrX:10479842-10479989 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 62

Conread position: 8-152
Cow position: chrX:26979698-26979545 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 79

Conread position: 8-153
Cow position: chrX:30962784-30962630 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 33, 79

Conread position: 9-144
Cow position: chrX:20339800-20339659 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 74

Conread position: 9-144
Cow position: chrX:31729536-31729673 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 97, 53

Conread position: 9-152
Cow position: chrX:30133224-30133080 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 60

Conread position: 10-142
Cow position: chrX:26205353-26205225 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 46

Conread position: 10-145
Cow position: chrX:42894021-42894162 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 68

Conread position: 10-152
Cow position: chrX:7351392-7351541 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 133

Conread position: 10-153
Cow position: chrX:34441359-34441209 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 73

Conread position: 10-158
Cow position: chrX:41215417-41215571 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 73

Conread position: 11-138
Cow position: chrX:32910195-32910327 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 68

Conread position: 11-146
Cow position: chrX:597383-597241 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 72

Conread position: 12-152
Cow position: chrX:41194002-41194150 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 21

Conread position: 17-145
Cow position: chrX:11454283-11454411 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 45

Show alignments to all cow chromosomes.