Cow genome map
| Conread name: | Fet1-UMC-pd20fet-004-b05 |
| Conread position: | 1-204 |
| Cow position: | chr1:3385023-3384812 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 69, 37 |
| Conread position: | 1-373 |
| Cow position: | chr1:65387321-65387704 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 280 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 1-375 |
| Cow position: | chr1:33551928-33552319 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 1-376 |
| Cow position: | chr1:16581501-16581133 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 72, 138 |
| Conread position: | 1-376 |
| Cow position: | chr1:16587077-16586709 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 72, 138 |
| Conread position: | 1-376 |
| Cow position: | chr1:102781294-102780921 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 266 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 71, 29 |
| Conread position: | 1-378 |
| Cow position: | chr1:42737459-42737836 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 3-324 |
| Cow position: | chr1:18274196-18274526 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 5-376 |
| Cow position: | chr1:99019004-99018617 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 6-225 |
| Cow position: | chr1:76620677-76620448 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 6-369 |
| Cow position: | chr1:63502832-63503194 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 32 |
| Conread position: | 6-380 |
| Cow position: | chr1:76750967-76750570 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 159 |
| Conread position: | 7-376 |
| Cow position: | chr1:70419373-70418996 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 31 |
| Conread position: | 9-374 |
| Cow position: | chr1:7409384-7409003 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 9-374 |
| Cow position: | chr1:84226816-84227182 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 9-375 |
| Cow position: | chr1:31359418-31359792 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 9-375 |
| Cow position: | chr1:62243634-62243263 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 29 |
| Conread position: | 9-375 |
| Cow position: | chr1:73070049-73069672 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 116, 29 |
| Conread position: | 9-375 |
| Cow position: | chr1:101861055-101860690 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 29 |
| Conread position: | 9-376 |
| Cow position: | chr1:73198015-73197641 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 11-329 |
| Cow position: | chr1:44100386-44100065 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 27 |
| Conread position: | 18-375 |
| Cow position: | chr1:3934242-3933866 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 24-370 |
| Cow position: | chr1:31812076-31812441 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 37-338 |
| Cow position: | chr1:31193684-31193378 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 152 |
| Conread position: | 47-376 |
| Cow position: | chr1:21355399-21355063 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 113 |
Show alignments to all cow chromosomes.