Cow genome map
| Conread name: | Fet1-UMC-pd20fet-004-b05 |
| Conread position: | 1-204 |
| Cow position: | chr11:10216678-10216481 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 1-363 |
| Cow position: | chr11:85393152-85392786 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 1-375 |
| Cow position: | chr11:11988788-11989185 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 1-375 |
| Cow position: | chr11:44582673-44582290 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 1-375 |
| Cow position: | chr11:71330252-71330647 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 162 |
| Conread position: | 1-376 |
| Cow position: | chr11:13065303-13064927 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 3-296 |
| Cow position: | chr11:36763415-36763712 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 92, 35 |
| Conread position: | 9-235 |
| Cow position: | chr11:54484742-54484512 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 9-373 |
| Cow position: | chr11:53286495-53286117 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 146, 29 |
| Conread position: | 9-375 |
| Cow position: | chr11:43513962-43513583 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 10-381 |
| Cow position: | chr11:9224877-9224501 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 18-313 |
| Cow position: | chr11:29232335-29232029 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 22-375 |
| Cow position: | chr11:9601629-9601275 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 24-363 |
| Cow position: | chr11:14728357-14728015 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 37-376 |
| Cow position: | chr11:26564393-26564042 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 31, 109 |
| Conread position: | 41-381 |
| Cow position: | chr11:75554285-75553942 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 49-350 |
| Cow position: | chr11:30207706-30208028 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 16, 92 |
Show alignments to all cow chromosomes.