Cow genome map


           Conread name:
           Fet1-UMC-pd20fet-004-b05
        

               Conread position:
               1-198
               

               Cow position:
               chr12:22204793-22204589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               1-373
               

               Cow position:
               chr12:600409-600029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               68, 38
               

               Conread position:
               1-375
               

               Cow position:
               chr12:27855015-27854624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 34
               

               Conread position:
               1-378
               

               Cow position:
               chr12:23161978-23161590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               1-382
               

               Cow position:
               chr12:17979685-17980061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 37
               

               Conread position:
               3-355
               

               Cow position:
               chr12:7863917-7863554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 34
               

               Conread position:
               6-267
               

               Cow position:
               chr12:36449521-36449787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               6-375
               

               Cow position:
               chr12:1403448-1403841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               9-323
               

               Cow position:
               chr12:43030427-43030097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 29
               

               Conread position:
               9-375
               

               Cow position:
               chr12:6405685-6405295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 29
               
Show alignments to all cow chromosomes.