Cow genome map
| Conread name: | Fet1-UMC-pd20fet-004-b05 |
| Conread position: | 1-285 |
| Cow position: | chr18:51274999-51274712 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 1-373 |
| Cow position: | chr18:37507006-37507392 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 1-375 |
| Cow position: | chr18:14417030-14417412 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 37 |
| Conread position: | 1-375 |
| Cow position: | chr18:16089184-16089552 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 21 |
| Conread position: | 1-375 |
| Cow position: | chr18:16175571-16175186 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 1-375 |
| Cow position: | chr18:23798694-23799082 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 1-380 |
| Cow position: | chr18:51481929-51482296 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 9-373 |
| Cow position: | chr18:14131446-14131826 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 11-374 |
| Cow position: | chr18:36177987-36177607 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 13-217 |
| Cow position: | chr18:16138035-16137820 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 17-375 |
| Cow position: | chr18:51461992-51461617 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 24-375 |
| Cow position: | chr18:12272591-12272931 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 27-290 |
| Cow position: | chr18:18528165-18528439 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 28-369 |
| Cow position: | chr18:29074063-29074408 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 40-374 |
| Cow position: | chr18:33300406-33300731 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 50-376 |
| Cow position: | chr18:56013678-56014018 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 78, 106 |
| Conread position: | 54-296 |
| Cow position: | chr18:33751360-33751607 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 67-375 |
| Cow position: | chr18:33270063-33270355 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 87-366 |
| Cow position: | chr18:51625165-51624884 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 87-371 |
| Cow position: | chr18:51614513-51614222 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 47, 34 |
Show alignments to all cow chromosomes.