Cow genome map


           Conread name:
           Fet1-UMC-pd20fet-004-b05
        

               Conread position:
               1-215
               

               Cow position:
               chr25:33259416-33259631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               1-376
               

               Cow position:
               chr25:13454584-13454203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 35
               

               Conread position:
               6-375
               

               Cow position:
               chr25:18888741-18888357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               9-373
               

               Cow position:
               chr25:11931773-11931401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               10-345
               

               Cow position:
               chr25:3377222-3376880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               77, 22
               

               Conread position:
               11-355
               

               Cow position:
               chr25:15364963-15365312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               66, 90
               

               Conread position:
               24-358
               

               Cow position:
               chr25:16057999-16057662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               29-376
               

               Cow position:
               chr25:34618746-34618387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 53
               

               Conread position:
               36-346
               

               Cow position:
               chr25:30158309-30157986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               42, 216
               
Show alignments to all cow chromosomes.