Cow genome map
| Conread name: | Fet1-UMC-pd20fet-004-b05 |
| Conread position: | 1-369 |
| Cow position: | chr5:40788845-40789223 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 37 |
| Conread position: | 1-375 |
| Cow position: | chr5:30580109-30580514 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 1-378 |
| Cow position: | chr5:4069993-4070394 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 2-376 |
| Cow position: | chr5:18400909-18400518 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 6-197 |
| Cow position: | chr5:48532813-48533001 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 6-355 |
| Cow position: | chr5:53625138-53624772 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 6-375 |
| Cow position: | chr5:46005072-46004687 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 6-378 |
| Cow position: | chr5:47830287-47829905 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 6-381 |
| Cow position: | chr5:34297726-34298096 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 9-170 |
| Cow position: | chr5:54861274-54861121 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 9-309 |
| Cow position: | chr5:41956584-41956269 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 9-375 |
| Cow position: | chr5:37733131-37733519 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 9-375 |
| Cow position: | chr5:48807951-48807562 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 30-376 |
| Cow position: | chr5:48137531-48137179 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 46-375 |
| Cow position: | chr5:48855039-48855382 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 49-375 |
| Cow position: | chr5:3503274-3502938 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 61-375 |
| Cow position: | chr5:14784512-14784200 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 81, 111 |
| Conread position: | 99-372 |
| Cow position: | chr5:15375598-15375875 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 48, 91 |
Show alignments to all cow chromosomes.