Cow genome map
| Conread name: | Fet1-UMC-pd20fet-004-b05 |
| Conread position: | 1-178 |
| Cow position: | chr9:2476608-2476789 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 89, 29 |
| Conread position: | 1-375 |
| Cow position: | chr9:5141568-5141938 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 1-375 |
| Cow position: | chr9:24981070-24980690 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 1-375 |
| Cow position: | chr9:29627903-29627514 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 1-375 |
| Cow position: | chr9:51181334-51180938 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 1-376 |
| Cow position: | chr9:29329484-29329873 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 37 |
| Conread position: | 1-380 |
| Cow position: | chr9:3167781-3168165 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 1-382 |
| Cow position: | chr9:3727448-3727846 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 2-375 |
| Cow position: | chr9:3963278-3962892 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 38 |
| Conread position: | 3-381 |
| Cow position: | chr9:3936582-3936184 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 85, 72 |
| Conread position: | 8-375 |
| Cow position: | chr9:2211998-2212377 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 9-241 |
| Cow position: | chr9:5515275-5515515 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 9-373 |
| Cow position: | chr9:21410151-21410536 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 9-373 |
| Cow position: | chr9:29027353-29026972 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 9-375 |
| Cow position: | chr9:5004829-5005223 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 9-375 |
| Cow position: | chr9:6250156-6250538 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 9-375 |
| Cow position: | chr9:7061225-7060839 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 9-380 |
| Cow position: | chr9:16176627-16176993 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 40-358 |
| Cow position: | chr9:33243439-33243120 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 33, 208 |
| Conread position: | 47-376 |
| Cow position: | chr9:30435467-30435826 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 41, 111 |
| Conread position: | 61-373 |
| Cow position: | chr9:130255-129928 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 290 |
| Conread position: | 73-373 |
| Cow position: | chr9:52033630-52033927 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 204, 17 |
| Conread position: | 95-271 |
| Cow position: | chr9:2841214-2841392 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 159 |
Show alignments to all cow chromosomes.