Cow genome map
| Conread name: | Fet1-UMC-pd20fet-004-b05 |
| Conread position: | 1-237 |
| Cow position: | chrX:28554366-28554609 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 1-325 |
| Cow position: | chrX:22488901-22489233 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 1-371 |
| Cow position: | chrX:29096951-29097339 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 1-372 |
| Cow position: | chrX:2011941-2011580 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 37 |
| Conread position: | 1-375 |
| Cow position: | chrX:971531-971920 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 278 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 1-375 |
| Cow position: | chrX:15126480-15126081 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 1-375 |
| Cow position: | chrX:20798077-20798458 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 1-375 |
| Cow position: | chrX:23277782-23278165 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 1-375 |
| Cow position: | chrX:38148346-38148741 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 1-376 |
| Cow position: | chrX:8574722-8574349 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 37 |
| Conread position: | 1-376 |
| Cow position: | chrX:41102710-41102330 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 31 |
| Conread position: | 1-378 |
| Cow position: | chrX:10416702-10416307 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 1-378 |
| Cow position: | chrX:29778753-29778364 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 1-382 |
| Cow position: | chrX:4752860-4752469 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 28 |
| Conread position: | 2-193 |
| Cow position: | chrX:47397195-47397000 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 3-380 |
| Cow position: | chrX:24476439-24476041 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 281 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 4-358 |
| Cow position: | chrX:41888220-41887865 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 6-375 |
| Cow position: | chrX:6872312-6871925 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 274 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 6-375 |
| Cow position: | chrX:7031224-7031609 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 81, 32 |
| Conread position: | 6-375 |
| Cow position: | chrX:32066404-32066023 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 9-375 |
| Cow position: | chrX:11148571-11148190 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 10-376 |
| Cow position: | chrX:44388534-44388906 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 28 |
| Conread position: | 24-374 |
| Cow position: | chrX:13182347-13181990 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 44-334 |
| Cow position: | chrX:6249680-6249378 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 49-326 |
| Cow position: | chrX:16700124-16700415 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 17 |
Show alignments to all cow chromosomes.