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Cow genome map

           
Conread name:
           
Fet1-UMC-pd20fet-008-d08
        

               
Conread position:
               
179-394
               

               
Cow position:
               
chr16:35297375-35297598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
181-402
               

               
Cow position:
               
chr16:23366215-23366429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
185-389
               

               
Cow position:
               
chr16:12939594-12939808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
185-406
               

               
Cow position:
               
chr16:9596345-9596578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
186-404
               

               
Cow position:
               
chr16:9578515-9578287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
187-404
               

               
Cow position:
               
chr16:48493157-48493368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
189-332
               

               
Cow position:
               
chr16:45046815-45046959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
189-394
               

               
Cow position:
               
chr16:14106621-14106840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
189-401
               

               
Cow position:
               
chr16:16565100-16565311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
190-368
               

               
Cow position:
               
chr16:25484319-25484492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-368
               

               
Cow position:
               
chr16:42242137-42241953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-386
               

               
Cow position:
               
chr16:26676705-26676501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
190-389
               

               
Cow position:
               
chr16:27723205-27723402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
190-392
               

               
Cow position:
               
chr16:29037899-29038111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
190-393
               

               
Cow position:
               
chr16:48145419-48145210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
190-394
               

               
Cow position:
               
chr16:9958809-9959025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
190-394
               

               
Cow position:
               
chr16:18953564-18953777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
190-395
               

               
Cow position:
               
chr16:22738260-22738465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-395
               

               
Cow position:
               
chr16:26030904-26030679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
190-398
               

               
Cow position:
               
chr16:12324435-12324654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
190-398
               

               
Cow position:
               
chr16:18205940-18206155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
190-399
               

               
Cow position:
               
chr16:13306891-13306670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
190-399
               

               
Cow position:
               
chr16:15370664-15370885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
190-399
               

               
Cow position:
               
chr16:22984736-22984951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
190-399
               

               
Cow position:
               
chr16:29712400-29712617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
190-399
               

               
Cow position:
               
chr16:34291311-34291099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
190-400
               

               
Cow position:
               
chr16:11957598-11957378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-400
               

               
Cow position:
               
chr16:22772959-22773176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-400
               

               
Cow position:
               
chr16:43661430-43661629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
190-400
               

               
Cow position:
               
chr16:50931538-50931331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
190-400
               

               
Cow position:
               
chr16:51598632-51598411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-400
               

               
Cow position:
               
chr16:53408950-53408745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
190-401
               

               
Cow position:
               
chr16:8673629-8673407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
190-401
               

               
Cow position:
               
chr16:11082978-11083199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
190-401
               

               
Cow position:
               
chr16:14242351-14242571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-401
               

               
Cow position:
               
chr16:25839600-25839814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-401
               

               
Cow position:
               
chr16:47852613-47852395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-401
               

               
Cow position:
               
chr16:51043637-51043846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-402
               

               
Cow position:
               
chr16:11584424-11584203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
190-402
               

               
Cow position:
               
chr16:50289132-50289361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-403
               

               
Cow position:
               
chr16:8441827-8441627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
190-403
               

               
Cow position:
               
chr16:39165220-39165438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-403
               

               
Cow position:
               
chr16:52275149-52274930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr16:7665617-7665846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr16:8025875-8025663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr16:11008325-11008534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
139, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr16:14685413-14685185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr16:16697679-16697441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr16:23681347-23681567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr16:23823047-23822822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr16:26372969-26372757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr16:29655305-29655520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr16:41530320-41530102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr16:42433131-42432911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr16:30186625-30186852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr16:42734031-42733813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr16:49860212-49860440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr16:50453739-50453955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr16:54664820-54664591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
190-406
               

               
Cow position:
               
chr16:11359131-11359355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-406
               

               
Cow position:
               
chr16:36121003-36120786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
190-406
               

               
Cow position:
               
chr16:38243681-38243455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
190-406
               

               
Cow position:
               
chr16:44428863-44429087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
190-406
               

               
Cow position:
               
chr16:49336208-49336428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
190-407
               

               
Cow position:
               
chr16:19670373-19670149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-414
               

               
Cow position:
               
chr16:13712953-13712726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
191-394
               

               
Cow position:
               
chr16:238249-238462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
191-399
               

               
Cow position:
               
chr16:30939927-30940130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
191-403
               

               
Cow position:
               
chr16:7496238-7496454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
124, 17
               

               
Conread position:
               
191-404
               

               
Cow position:
               
chr16:820231-820457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
191-404
               

               
Cow position:
               
chr16:13996214-13995989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
192-390
               

               
Cow position:
               
chr16:14754345-14754136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
192-393
               

               
Cow position:
               
chr16:33595955-33595753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
192-399
               

               
Cow position:
               
chr16:6609522-6609308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
192-400
               

               
Cow position:
               
chr16:23472731-23472944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
192-402
               

               
Cow position:
               
chr16:44210576-44210355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
192-404
               

               
Cow position:
               
chr16:41590759-41590976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr16:22808579-22808367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
193-403
               

               
Cow position:
               
chr16:50286496-50286718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
193-406
               

               
Cow position:
               
chr16:7542272-7542495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
193-406
               

               
Cow position:
               
chr16:16265118-16264909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
194-392
               

               
Cow position:
               
chr16:54579151-54579359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
194-397
               

               
Cow position:
               
chr16:33704792-33705001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
194-398
               

               
Cow position:
               
chr16:11134997-11134785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
194-399
               

               
Cow position:
               
chr16:7418363-7418574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
194-399
               

               
Cow position:
               
chr16:46433343-46433123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
194-400
               

               
Cow position:
               
chr16:13689650-13689865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
194-401
               

               
Cow position:
               
chr16:37401235-37401442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
194-402
               

               
Cow position:
               
chr16:31149362-31149579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
194-402
               

               
Cow position:
               
chr16:52834904-52834697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
194-405
               

               
Cow position:
               
chr16:20476519-20476741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
194-405
               

               
Cow position:
               
chr16:51500916-51501135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
194-406
               

               
Cow position:
               
chr16:10148266-10148477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
194-406
               

               
Cow position:
               
chr16:19052619-19052839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
195-393
               

               
Cow position:
               
chr16:7626144-7626348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
195-400
               

               
Cow position:
               
chr16:48567518-48567730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
195-405
               

               
Cow position:
               
chr16:52170040-52170260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
196-397
               

               
Cow position:
               
chr16:30601407-30601600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
196-402
               

               
Cow position:
               
chr16:29636245-29636041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
196-404
               

               
Cow position:
               
chr16:50933897-50933688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
197-387
               

               
Cow position:
               
chr16:33632688-33632489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
198-382
               

               
Cow position:
               
chr16:16570903-16571084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr16:33646003-33646203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr16:47518833-47519028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
198-398
               

               
Cow position:
               
chr16:31079103-31078903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
198-399
               

               
Cow position:
               
chr16:9985405-9985201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
198-403
               

               
Cow position:
               
chr16:27659763-27659561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
198-403
               

               
Cow position:
               
chr16:31561743-31561959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
198-404
               

               
Cow position:
               
chr16:8017955-8018164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
198-404
               

               
Cow position:
               
chr16:40514494-40514287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
198-404
               

               
Cow position:
               
chr16:55233672-55233884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
198-406
               

               
Cow position:
               
chr16:8530895-8530689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
199-388
               

               
Cow position:
               
chr16:31484673-31484476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
199-402
               

               
Cow position:
               
chr16:20824466-20824681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
199-404
               

               
Cow position:
               
chr16:42078858-42078642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
200-394
               

               
Cow position:
               
chr16:48095775-48095573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
200-404
               

               
Cow position:
               
chr16:258292-258076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 10
               

               
Conread position:
               
202-395
               

               
Cow position:
               
chr16:51143788-51143996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
207-387
               

               
Cow position:
               
chr16:28199025-28199217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
208-384
               

               
Cow position:
               
chr16:9079336-9079517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
208-397
               

               
Cow position:
               
chr16:30211451-30211648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
209-369
               

               
Cow position:
               
chr16:41578224-41578397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
209-385
               

               
Cow position:
               
chr16:14568491-14568304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr16:30908949-30908753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr16:6344442-6344258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 42
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr16:30305814-30305617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
209-402
               

               
Cow position:
               
chr16:9836775-9836577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
209-402
               

               
Cow position:
               
chr16:46552792-46552996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
85, 192
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr16:14210774-14210577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr16:50688519-50688712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
85, 120
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr16:280684-280486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 113
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr16:1548880-1548676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
81, 190
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr16:18573056-18572848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr16:31117616-31117413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr16:45554439-45554640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
209-406
               

               
Cow position:
               
chr16:36286684-36286479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
209-407
               

               
Cow position:
               
chr16:44138494-44138282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
210-380
               

               
Cow position:
               
chr16:45826719-45826539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
210-401
               

               
Cow position:
               
chr16:49126188-49125987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
210-402
               

               
Cow position:
               
chr16:7723700-7723903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 160
               

               
Conread position:
               
210-402
               

               
Cow position:
               
chr16:40333325-40333131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
210-404
               

               
Cow position:
               
chr16:12320220-12320429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
211-387
               

               
Cow position:
               
chr16:3466857-3467033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
211-398
               

               
Cow position:
               
chr16:7136345-7136146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
213-401
               

               
Cow position:
               
chr16:53451707-53451908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
213-402
               

               
Cow position:
               
chr16:49229766-49229570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
81, 153
               

               
Conread position:
               
213-405
               

               
Cow position:
               
chr16:11653140-11653337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
214-385
               

               
Cow position:
               
chr16:10504830-10505001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr16:13989978-13990165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
214-408
               

               
Cow position:
               
chr16:17474768-17474966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
80, 91
               

               
Conread position:
               
215-402
               

               
Cow position:
               
chr16:45047630-45047451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
215-403
               

               
Cow position:
               
chr16:41807098-41806919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
215-404
               

               
Cow position:
               
chr16:56231831-56232018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 101
               

               
Conread position:
               
215-406
               

               
Cow position:
               
chr16:18557260-18557074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
217-399
               

               
Cow position:
               
chr16:42253393-42253204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
217-406
               

               
Cow position:
               
chr16:38355421-38355224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
219-402
               

               
Cow position:
               
chr16:29095929-29096121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
219-405
               

               
Cow position:
               
chr16:29766334-29766527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
220-399
               

               
Cow position:
               
chr16:28979841-28980033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
220-402
               

               
Cow position:
               
chr16:11660452-11660266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
220-404
               

               
Cow position:
               
chr16:8810085-8809891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
220-406
               

               
Cow position:
               
chr16:54710030-54709846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
222-397
               

               
Cow position:
               
chr16:8288936-8288752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
222-401
               

               
Cow position:
               
chr16:4102820-4102639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
223-406
               

               
Cow position:
               
chr16:44688379-44688191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
223-408
               

               
Cow position:
               
chr16:50569276-50569469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
225-404
               

               
Cow position:
               
chr16:16178046-16178231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
226-395
               

               
Cow position:
               
chr16:56579924-56580103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
86, 175
               

               
Conread position:
               
226-404
               

               
Cow position:
               
chr16:13290528-13290705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 91
               

               
Conread position:
               
228-404
               

               
Cow position:
               
chr16:7546809-7546630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
230-402
               

               
Cow position:
               
chr16:33134956-33135131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 124
               

               
Conread position:
               
231-398
               

               
Cow position:
               
chr16:15171376-15171218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
233-384
               

               
Cow position:
               
chr16:14226748-14226592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
233-403
               

               
Cow position:
               
chr16:39848969-39848800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
233-404
               

               
Cow position:
               
chr16:26069772-26069945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
235-400
               

               
Cow position:
               
chr16:11775969-11775795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
237-384
               

               
Cow position:
               
chr16:11654068-11654230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
237-404
               

               
Cow position:
               
chr16:30646538-30646715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
239-391
               

               
Cow position:
               
chr16:2738790-2738636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
242-405
               

               
Cow position:
               
chr16:17746068-17746240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
248-386
               

               
Cow position:
               
chr16:47773997-47774137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
266-406
               

               
Cow position:
               
chr16:4911391-4911243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               
Show alignments to all cow chromosomes.